G146257


Basic Information

Item Value
gene id G146257
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 19464007 ~ 19464975 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU183990
NNNGGGGGTCTGGAGGAGGACTCGGATGCTCGGGGCGTCCCTGGGGGAAAGGTGCTCTGTGATCCTCCGTGCGACTGAAGGACGAGATCTGTTCAGTGCAGCGGGAAATCTGAATTAAAGATCAGCGCGGGAAACCAAATCTTATGCCTTACTGAGTAAACCTATGTGGCTCGAGGCGCCCGTGACAGGCGTGCCGAGGGGTTGTCCGTGCCTTACTGGGGGTTGAAGAGTGTGCAGCACATACAGCTGTTAGCAGAGACTGACACTCACTTTAACACTGTGGTGTGTCAATTAAGAACCAGCTTGTAAAGggtgttattttattctctctgtGCAGGAGGTTAACTGTGAGTCTCTTCCCTCTGAAAATGGTGTTGTGTTGCTCAGTCTGAGCATCGCCACAATTCTCTGGGTTTTGTAGATCATGCAATTGTAACGGCACAATTTTCTAATGGGAGCCAAACCATTTTAGCAACGAGTCAGAGGAGGTTTAATTGTGGACATGAACTGTTTACGTTATTTTATCTTTAGATCCCTGATACTCACTTGAAATGGTTTGATACATCGGAGGAATCCGGTGCCCAGCTCAAGATGCATGTATCCCGTCTCAATTCACTCTCAGACTAGTTCACACGGCTACGGGTTGTCTCCTGTGTCTGATCTGTTGAACCTGAGTCAAACTGCTCTGGTGTCTCCTTTGCGCTCGGATGCAGAAAACTGGAGTCACTGCAGCTCGACGAGACCGTGCAGATGCAAAATGTCCTACTAATGCAATCCTGGTGCATTAGGGAACATTTGTAAGTAATTCTAAAGCACTGCTTGCCTCTGTCTGTTCCCCCTGCATTGCTCTGTGATTCAGAAGCCATTTACACAAGTTCAGATGtcaatgtgttttataaagACGTCCTCAATATCTGTCACCAgatgtttggtgttttttttttttaaagagcacaATAAAGAATATGC

Function

GO:

id name namespace
GO:0009653 anatomical structure morphogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU183990 True 969 lncRNA 0.46 1 19464007 19464975

Neighbor

gene id symbol gene type direction distance location
AMCG00005222 foxd3,LOC107717135,LOC107591180,LOC107692383 coding downstream 96742 19366141 ~ 19367265 (-)
AMCG00005220 NA coding downstream 104339 19349572 ~ 19359668 (-)
AMCG00005221 NA coding downstream 123298 19332241 ~ 19340709 (-)
AMCG00005219 pgm1,LOC106568718,LOC107731639,LOC107704513,LOC107591179,LOC107739071 coding downstream 134004 19316755 ~ 19330003 (-)
AMCG00005226 NA coding downstream 219390 19243699 ~ 19244617 (-)
AMCG00005227 NA coding upstream 1221 19466196 ~ 19475443 (-)
AMCG00005234 NA coding upstream 23675 19488650 ~ 19492515 (-)
AMCG00005233 NA coding upstream 58837 19523812 ~ 19529682 (-)
AMCG00005228 NA coding upstream 110261 19575236 ~ 19600283 (-)
AMCG00005230 NA coding upstream 158280 19623255 ~ 19627636 (-)
G146227 NA non-coding downstream 244249 19218391 ~ 19219758 (-)
G146189 NA non-coding downstream 377966 19083995 ~ 19086041 (-)
G146023 NA non-coding downstream 1111875 18351867 ~ 18352132 (-)
G146022 NA non-coding downstream 1165904 18297847 ~ 18298103 (-)
G145995 NA non-coding downstream 1438333 18024765 ~ 18025674 (-)
G146315 NA non-coding upstream 145791 19610766 ~ 19611005 (-)
G146322 NA non-coding upstream 239029 19704004 ~ 19732117 (-)
G146347 NA non-coding upstream 289221 19754196 ~ 19754744 (-)
G146348 NA non-coding upstream 291272 19756247 ~ 19757237 (-)
G146358 NA non-coding upstream 306797 19771772 ~ 19774991 (-)
AMCG00005214 NA other downstream 439546 19013077 ~ 19024461 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other downstream 699709 18741884 ~ 18764298 (-)
AMCG00005158 NA other downstream 1917675 17543146 ~ 17546332 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 3485152 15958704 ~ 15978855 (-)
AMCG00005111 NA other downstream 3928862 15503082 ~ 15535145 (-)
G146313 NA other upstream 105084 19570059 ~ 19573318 (-)
AMCG00005240 NA other upstream 293257 19758232 ~ 19761446 (-)
AMCG00005256 cpt2,clg17h1orf123,c20h1orf123,cunh1orf123,LOC107668114,LOC107585892,LOC107695271,LOC108441638,LOC107549124,LOC105891296,LOC105925314,LOC106930840,LOC103363808 other upstream 534192 19999167 ~ 20023507 (-)
AMCG00005263 NA other upstream 638651 20103626 ~ 20107827 (-)
G146532 NA other upstream 809416 20274391 ~ 20279746 (-)

Expression


Co-expression Network