G146315


Basic Information

Item Value
gene id G146315
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 19610766 ~ 19611005 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU184066
gtccaatcgagaggatcccattcgccccatcgtgctcgtctggtgtccattaataactaagtgatcaaggatcctatccagtctgtttttgaatgttcccaaattgtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtctcgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgc

Function

GO: NA

KEGG:

id description
ko00512 Mucin type O-glycan biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU184066 True 240 lncRNA 0.49 1 19610766 19611005

Neighbor

gene id symbol gene type direction distance location
AMCG00005228 NA coding downstream 10483 19575236 ~ 19600283 (-)
AMCG00005233 NA coding downstream 81084 19523812 ~ 19529682 (-)
AMCG00005234 NA coding downstream 118251 19488650 ~ 19492515 (-)
AMCG00005227 NA coding downstream 135323 19466196 ~ 19475443 (-)
AMCG00005222 foxd3,LOC107717135,LOC107591180,LOC107692383 coding downstream 243501 19366141 ~ 19367265 (-)
AMCG00005230 NA coding upstream 12250 19623255 ~ 19627636 (-)
AMCG00005229 NA coding upstream 53096 19664101 ~ 19669052 (-)
AMCG00005241 NA coding upstream 115939 19726944 ~ 19741365 (-)
AMCG00005250 LOC103463064,LOC103355575,LOC104919037,LOC103137203,LOC101157045 coding upstream 173869 19784874 ~ 19799356 (-)
AMCG00005249 NA coding upstream 188729 19799734 ~ 19805056 (-)
G146257 NA non-coding downstream 145791 19464007 ~ 19464975 (-)
G146227 NA non-coding downstream 391008 19218391 ~ 19219758 (-)
G146189 NA non-coding downstream 524725 19083995 ~ 19086041 (-)
G146023 NA non-coding downstream 1258634 18351867 ~ 18352132 (-)
G146022 NA non-coding downstream 1312663 18297847 ~ 18298103 (-)
G146322 NA non-coding upstream 92999 19704004 ~ 19732117 (-)
G146347 NA non-coding upstream 143191 19754196 ~ 19754744 (-)
G146348 NA non-coding upstream 145242 19756247 ~ 19757237 (-)
G146358 NA non-coding upstream 160767 19771772 ~ 19774991 (-)
G146461 NA non-coding upstream 439111 20050116 ~ 20052921 (-)
G146313 NA other downstream 37448 19570059 ~ 19573318 (-)
AMCG00005214 NA other downstream 586305 19013077 ~ 19024461 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other downstream 846468 18741884 ~ 18764298 (-)
AMCG00005158 NA other downstream 2064434 17543146 ~ 17546332 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 3631911 15958704 ~ 15978855 (-)
AMCG00005240 NA other upstream 147227 19758232 ~ 19761446 (-)
AMCG00005256 cpt2,clg17h1orf123,c20h1orf123,cunh1orf123,LOC107668114,LOC107585892,LOC107695271,LOC108441638,LOC107549124,LOC105891296,LOC105925314,LOC106930840,LOC103363808 other upstream 388162 19999167 ~ 20023507 (-)
AMCG00005263 NA other upstream 492621 20103626 ~ 20107827 (-)
G146532 NA other upstream 663386 20274391 ~ 20279746 (-)
AMCG00005270 pik3r3b,LOC107675943,LOC106584012 other upstream 705055 20316060 ~ 20339165 (-)

Expression


Co-expression Network