G146322


Basic Information

Item Value
gene id G146322
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 19704004 ~ 19732117 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU184074
CGTAAGTAAGGACCCGGCGCACAGTAGAGGTGGCGTTCGTAGTGCCTGACAAAAATTTCGATCGATTTTGCGTTTGCCCGGTTTTATAAACTTTTAATTCAATATTGCGTTTATTATGTCACggaagacatttgtttttatggtgGAGGAGGTTTTGCCAGAGCTGGAAAGGGAGACAGGCCGAGTCCAGCGCTGGCCTTAGTGACTCTGGCGAGCAGGAGTTGTTTTTGGAAGGCCTGGATCCTGTTGTGGATTTGACCTGTCGCGAGCCCACAGCATGCAAGAGACCGTTACACGTTTTCCTGAGAGGACGTCTCGGTTCCCACTGAGATCACGTCGGAATCGGGGCTTCCTTGTGGAGCTgcgagaggagagagaggtcaGGCGTGAGGGTCGGGTCATACGAAGCATAAGGATTTTAAACCTGTAACATAATGAAGTCtgtgaaagaaagcaaaaataaatctcaagaAGGCTGAGCAATGAAAACTGACTTCTGGTGCCCTCTTCTGGTGATGTCATGTCATTTTCACCACCTAAAGTCTGTTTAGCATCATTACACATACATCAGCAccattaataatacacataatccACTTCTCAC

Function

NR:

description
PREDICTED: protein diaphanous homolog 1 isoform X2

GO:

id name namespace
GO:0030145 manganese ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184074 True 604 lncRNA 0.47 2 19704004 19732117

Neighbor

gene id symbol gene type direction distance location
AMCG00005229 NA coding downstream 34952 19664101 ~ 19669052 (-)
AMCG00005230 NA coding downstream 76368 19623255 ~ 19627636 (-)
AMCG00005228 NA coding downstream 103721 19575236 ~ 19600283 (-)
AMCG00005233 NA coding downstream 174322 19523812 ~ 19529682 (-)
AMCG00005234 NA coding downstream 211489 19488650 ~ 19492515 (-)
AMCG00005250 LOC103463064,LOC103355575,LOC104919037,LOC103137203,LOC101157045 coding upstream 52757 19784874 ~ 19799356 (-)
AMCG00005249 NA coding upstream 67617 19799734 ~ 19805056 (-)
AMCG00005251 orc1 coding upstream 114674 19846791 ~ 19855209 (-)
AMCG00005252 NA coding upstream 125741 19857858 ~ 19878152 (-)
AMCG00005243 LOC107737066,LOC107384472 coding upstream 174969 19907086 ~ 19916367 (-)
G146315 NA non-coding downstream 92999 19610766 ~ 19611005 (-)
G146257 NA non-coding downstream 239029 19464007 ~ 19464975 (-)
G146227 NA non-coding downstream 484246 19218391 ~ 19219758 (-)
G146189 NA non-coding downstream 617963 19083995 ~ 19086041 (-)
G146023 NA non-coding downstream 1351872 18351867 ~ 18352132 (-)
G146347 NA non-coding upstream 22079 19754196 ~ 19754744 (-)
G146348 NA non-coding upstream 24130 19756247 ~ 19757237 (-)
G146358 NA non-coding upstream 39655 19771772 ~ 19774991 (-)
G146461 NA non-coding upstream 317999 20050116 ~ 20052921 (-)
G146469 NA non-coding upstream 330432 20062549 ~ 20063413 (-)
G146313 NA other downstream 130686 19570059 ~ 19573318 (-)
AMCG00005214 NA other downstream 679543 19013077 ~ 19024461 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other downstream 939706 18741884 ~ 18764298 (-)
AMCG00005158 NA other downstream 2157672 17543146 ~ 17546332 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 3725149 15958704 ~ 15978855 (-)
AMCG00005240 NA other upstream 26115 19758232 ~ 19761446 (-)
AMCG00005256 cpt2,clg17h1orf123,c20h1orf123,cunh1orf123,LOC107668114,LOC107585892,LOC107695271,LOC108441638,LOC107549124,LOC105891296,LOC105925314,LOC106930840,LOC103363808 other upstream 267050 19999167 ~ 20023507 (-)
AMCG00005263 NA other upstream 371509 20103626 ~ 20107827 (-)
G146532 NA other upstream 542274 20274391 ~ 20279746 (-)
AMCG00005270 pik3r3b,LOC107675943,LOC106584012 other upstream 583943 20316060 ~ 20339165 (-)

Expression


Co-expression Network