G146599


Basic Information

Item Value
gene id G146599
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 20682625 ~ 20738321 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU184442
CTTTTCTATCTCTTCCAAGTAGCAGTCGATGTAGTCCCGGGGGGCTAAAGGATCTCGGTCTTGCTGGTGTTTGCTGACCTCTTCCCTCAGGAAGTCGCACACCTTTTTGTAGTCTGAGAAGAGGAGCTGGTGGCCTCCAGAaactaggagtcaccctcgaccctgcgctctcctacacccagcacatcaccacgctgacgcgcacctgtagattcttcctgagcagcatacgccggatccgacccttcctcaccgactactcgacttcTTGCACCAGAAGATTAACTCTGCCTCCtgtccactccccttcctccagagctgctccttttgtttattttgatttcccctttgtcCCCTTTACCTCggctcttaactatgacttcagtGTATCTTGTCTGCGGTTGTTAGCTATTACAATCAAGGATGTAGGACTTTTATTCTATATTAACTGTATGATTTACCcatgcacttctgtaattttgatCCTGtcattgtattatgttttgatctgtatttttatactgtattattgcacttttgtgtCGCTCTTATATtctgtaagtctccctggataagggtgtctgctaagacataaatattattaataataatactaataataataataataataataatataggttTTCTGTACCGTGGCCCATATGCTTCCTTCTAGATAAACTGCTTCAAATATCAAACGCAGAAGCTGTTGATAGGAA
>TU184443
CTTTTCTATCTCTTCCAAGTAGCAGTCGATGTAGTCCCGGGGGGCTAAAGGATCTCGGTCTTGCTGGTGTTTGCTGACCTCTTCCCTCAGGAAGTCGCACACCTTTTTGTAGTCTGAGAAGAGGAGCTGGTGGCCTCCAGAaactaggagtcaccctcgaccctgcgctctcctacacccagcacatcaccacgctgacgcgcacctgtagattcttcctgagcagcatacgccggatccgacccttcctcaccgactactcgacttcTTGCACCAGAAGATTAACTCTGCCTCCtgtccactccccttcctccagagctgctccttttgtttattttgatttcccctttgtcCCCTTTACCTCggctcttaactatgacttcagtGTATCTTGTCTGCGGTTGTTAGCTATTACAATCAAGGATGTAGGACTTTTATTCTATATTAACTGTATGATTTACCcatgcacttctgtaattttgatCCTGtcattgtattatgttttgatctgtatttttatactgtattattgcacttttgtgtCGCTCTTATATtctgtaagtctccctggataagggtgtctgctaagacataaatattattaataataatactaataataataataataataataatataggttTTCTGTACCtcgccctggacaaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184442 True 721 lncRNA 0.43 2 20682625 20683984
TU184443 False 671 lncRNA 0.44 3 20682625 20738321

Neighbor

gene id symbol gene type direction distance location
AMCG00005279 NA coding upstream 54694 20597743 ~ 20627931 (+)
AMCG00005278 NA coding upstream 86871 20589746 ~ 20595754 (+)
AMCG00005274 NA coding upstream 192961 20484932 ~ 20489664 (+)
AMCG00005273 mast2 coding upstream 473168 20208791 ~ 20209457 (+)
AMCG00005260 NA coding upstream 507294 20172733 ~ 20175331 (+)
AMCG00005287 si:ch211-121a2.4,LOC107687197,LOC107581514,LOC103033168,LOC108416079,LOC107712847 coding downstream 2857 20741178 ~ 20742301 (+)
AMCG00005288 NA coding downstream 25311 20763632 ~ 20768980 (+)
AMCG00005282 NA coding downstream 42987 20781308 ~ 20794020 (+)
AMCG00005281 NA coding downstream 65300 20803621 ~ 20806381 (+)
AMCG00005283 NA coding downstream 68880 20807201 ~ 20814750 (+)
G146590 NA non-coding upstream 26852 20642268 ~ 20655773 (+)
G146544 NA non-coding upstream 349503 20316007 ~ 20333122 (+)
G146486 NA non-coding upstream 573084 20108102 ~ 20109541 (+)
G146450 NA non-coding upstream 656564 20024173 ~ 20026061 (+)
G146442 NA non-coding upstream 671490 20007416 ~ 20011135 (+)
G146640 NA non-coding downstream 11983 20750304 ~ 20750938 (+)
G146701 NA non-coding downstream 117390 20855711 ~ 20855918 (+)
G146703 NA non-coding downstream 128885 20867206 ~ 20867406 (+)
G146749 NA non-coding downstream 325652 21063973 ~ 21064908 (+)
G146782 NA non-coding downstream 588211 21326532 ~ 21328902 (+)
G146596 NA other upstream 12456 20661926 ~ 20670169 (+)
G146575 LOC103468264,LOC108238356,LOC106512499 other upstream 157806 20521649 ~ 20524819 (+)
AMCG00005272 mast2 other upstream 402839 20253009 ~ 20279786 (+)
G146519 NA other upstream 497982 20182354 ~ 20184643 (+)
G146305 NA other upstream 1102818 19579573 ~ 19579807 (+)
AMCG00005280 NA other downstream 59137 20797458 ~ 20803197 (+)
G146790 NA other downstream 599111 21337432 ~ 21340712 (+)
AMCG00005329 ipo13,LOC103463745,LOC105910849 other downstream 828317 21566638 ~ 21572321 (+)
AMCG00005340 ralgps2,LOC106531732 other downstream 942387 21680708 ~ 21704518 (+)
G146952 NA other downstream 1073411 21811732 ~ 21848136 (+)

Expression


Co-expression Network