G146915


Basic Information

Item Value
gene id G146915
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21710357 ~ 21712783 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU184834
CCCACATCTACCACTCGGCCTCGGCCCCGCCGGGGGGAGCGTCTGCATTTTTCTGACATGATAACACTGGGCTTTCCTTGTCCCGTCTGCTCACGTGCGTGGCGCGGCTGAGGCGGCGGGGGACGCAGGGTCGCGTGTTTAAAGGCCTGAAGATCTcaccggggtgggggggctgcagACTGGGGCAGCGAGAGCAGGGAATAAAGAGTCCGAGGAGCAGGGGGTATTTAAAAATAGGTTTATTTTGGTATCTAGTGGTAGTAGGAGTAGGTTGGCAGAGTTGGGCCTCAGCTCCATCTCCTGTCACGAGTGTCTGTCCTGACAGAAGGGGTTCTGGAGTGGAACAGGCTCTGGGCCTGGAAACCCAATGACAGAACTTACAGAAACACAAGACTATATCCCATTTAAATAAGGCGATAAATAATGGCGGGAGGTTGGGGGGACGGGGGTAGGTATAGGGGGTTTTGCCGAAGCTAGGCCGCCCCCCCCGAGCACACGGACAGAGCGGTCACTGCATCCCTCTGCACTGAGTGGGCGGCTTCNNGGCACTGGGCTGTGTGCGCActctgtgcaggtgtgtgtgtgcacgtgtcgGGGTCTCTCCAGGGCACTgggctgtgtgcgtgtgtcaggGTCCCTCCGGGGCGCTGGGTTGCGGTCCGTGTCCGTGTGAGCTGCTCTGCAGAGCTCAGtgtccttccctccctcctgcaGCTCCCACGGTGCACTGGGCCCAGCAGTTCTCTCGCTTCTCTGGCCCGTGACGGGTGTGGAGAAGCATCCCTAGCTTTTTCTCCCGGAATCAATGAGCCGCACAGACGGTGGTGGTGCTGAGGGTAGTGTGCCGCCTGCTGCTGTACCTGCTGGGGGGCGTCTCTCTCTaacactgctgtgctgtgagCTGCTTTCTGTCTGGACACTGTCCTCCTTCCCAGTCCTCTGGAAGGACtagagggagaggagggtggaGGGCGAGGCAGGTGAGGAAGGTGCGGCCCAGGCGATGCATCCCAAGAACTGTCatccataaacacacacactgcacacaacacacgGCACACAtatgacacactgcacacacaggcacaggcCAGTGCGGTCTCCACTGTATACACCGTGAATGTGGAGAGAGGGGGTCGGGGGTGAGTGGGGTGGGGTCAGGGCAGGGTGGGGTAGAAGCAGTGGGTGAgtccggcccggcccggcccggcctgTCCTCAGTCTATGGGCCGGATCATCATCTGCACCGCCTTCAAAGAGTAGAATCCACCCCCGTAGTCGGCCCAGAAGATGCCGTCCTGGAACTTGCTGCGGTACACCCCCCCGCTGTACCAAACCCCGTTCAGGTTAGTCTGTCCGCAGGCGTTGTACCACCAGCCGCCCTTGTGGAAATGGGCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184834 True 1400 lncRNA 0.60 2 21710357 21712783

Neighbor

gene id symbol gene type direction distance location
AMCG00005339 ralgps2,LOC107581502,LOC107712857 coding upstream 1963 21707342 ~ 21708394 (+)
AMCG00005322 NA coding upstream 31254 21677587 ~ 21679103 (+)
AMCG00005317 NA coding upstream 43467 21662349 ~ 21666890 (+)
AMCG00005316 LOC107721804,LOC107712838,LOC105910841,LOC107597850,LOC101160230,LOC107581484 coding upstream 57569 21641391 ~ 21652788 (+)
AMCG00005315 NA coding upstream 75190 21630980 ~ 21635167 (+)
AMCG00005336 LOC106584283,LOC106613957 coding downstream 9797 21722580 ~ 21727870 (+)
AMCG00005337 NA coding downstream 20598 21733381 ~ 21737650 (+)
AMCG00005338 NA coding downstream 24901 21737684 ~ 21740828 (+)
AMCG00005335 LOC106569412 coding downstream 43404 21756187 ~ 21757882 (+)
AMCG00005344 NA coding downstream 160244 21873027 ~ 21878534 (+)
G146815 NA non-coding upstream 311386 21398676 ~ 21398971 (+)
G146782 NA non-coding upstream 381455 21326532 ~ 21328902 (+)
G146749 NA non-coding upstream 645449 21063973 ~ 21064908 (+)
G146703 NA non-coding upstream 842951 20867206 ~ 20867406 (+)
G146701 NA non-coding upstream 854439 20855711 ~ 20855918 (+)
G146928 NA non-coding downstream 32096 21744879 ~ 21745451 (+)
G147022 NA non-coding downstream 235303 21948086 ~ 21948618 (+)
G147024 NA non-coding downstream 237545 21950328 ~ 21950587 (+)
G147027 NA non-coding downstream 243818 21956601 ~ 21957045 (+)
G147066 NA non-coding downstream 368861 22081644 ~ 22087344 (+)
AMCG00005340 ralgps2,LOC106531732 other upstream 5839 21680708 ~ 21704518 (+)
AMCG00005329 ipo13,LOC103463745,LOC105910849 other upstream 138036 21566638 ~ 21572321 (+)
G146790 NA other upstream 369645 21337432 ~ 21340712 (+)
AMCG00005280 NA other upstream 907160 20797458 ~ 20803197 (+)
AMCG00005286 NA other upstream 1007885 20699486 ~ 20702472 (+)
G146952 NA other downstream 98949 21811732 ~ 21848136 (+)
AMCG00005345 NA other downstream 170416 21883199 ~ 21887568 (+)
G147021 NA other downstream 232775 21945558 ~ 21947991 (+)
G147025 NA other downstream 239786 21952569 ~ 21952882 (+)
G147029 NA other downstream 244657 21957440 ~ 21984144 (+)

Expression


Co-expression Network