G146952


Basic Information

Item Value
gene id G146952
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21811732 ~ 21848136 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU184875
tttttttaaatACaaagttcattttatttagaaattcACAGTTTCTAATGGCACTACATCTCTGCAGTGACACTGCGCTCCAGAGGACTGTGCAGCTCACTCTCACAGACAAAGATGAGCAGCATGGCGCCTGGCAGACGAGCGCTCGACACACacggtgcattgtgggaaaacAGAAGGCAAGAGGAGTGATAAGAGTGCAAGTTGAGCCGAAACCCTTTCACAGCAGGGCGACCAGCCACACAGCCGGGACAGCGTCCCCAGACATTCGGGTTAAAAAACATTCACCATCTCACGATCGCACAACACGCACGCACAACTCCCACGTACTTacttgcacacacacgcacagccTTGTCCCCCCCAGTCACATCCCTGTCCTGTCAGAGGTCTCTCATGgtgattaaacacacaaacaccagtCCCCACTGCGAACATGTCAGGCACCTTTCACAAAACCACTGTGCACAACACCCCCCCCAAGTAGTGAACAGGGAAATACAGCAACACTGCGGGACAGAACCCCCCCGGCATTGTAACGGGAGAGACCATCACAGACCCCCCCAACACTAGAATCGGGCCTCGGGTCTGGGTCTTCATCACTGACTGCATTGCTtatgcataaaaaaatacatataaaaagtaGAGTTTTTGGTCTGCCTGCATCAGACTGCAGACACCGGGACGAAACGGGTCAGAACCACACCGGACGAGTCAACGGGACTAGAACCTCCGGAGCGGGGCACAGGGCCGACGGGAATGATCAGGCTGATGCAACTAAAACACTGGCCAGTCTACTGTGGGGAGCATAGGGGACAATGCAGAGGGATAGGGGGCACAGGGCCACCGAACACCTGGTCTCGGGGGAGGGCCACGCTGGCCCCACAGGGAGCCCCGACTGACTGTGTGGAACCGCAGGctccgacacacacacacacacacacacacacacacacacgtaccgGAAGGACAGCAGTCCAACAAACGATTGTCTGAGGAGGAAGAAAACCTTACAGATGTCCAAATACTGAACAGGCGTCTCTACAGGAGAGAGGCGGGAGTCACGGGGAGCTGGAGACGCAGGGGGCCAGAGCAGTGTGTCCCCCCCCGGCCACAacccacagcacagacacacgtCCCTCTGCTCACACTGCTCATTACGGTCACAGTTTTCCAGATGTCCAATGCGGAGGCCGCTGTGTGTTAGGCTCTGCTGCCGCGCCCCCCCCGCCAAGAGGCAGGTCTGTGggagtatttaaataaataattaaataaataaattagatgcagcagcagcagtcagtGGCCCTGCAGggcccctgacacacacagggtgGGTTCAGAATGCAGTCGCATCTTTGTCCTGCAAGTCTATCATCGGTTCTGCCCAGGTCGGATCGCTTCCCAAAGCATACACCCCcaccgggccgggccgggccctTTGACAGCACCGCTGCTCCACTACAAGACACTAAACAGAAGTTTAAAGACCTCAAACACCCTGACTCATCATCCAGAAGGGATTTCAGGACTGAACCTTTCCAGGTCATCCCTTGTTTTGAGAACCCAACCCACAACCCTGCGGGGGTGCGATCAGCAGACAGCCGTCCCCGGCCCGGCAGGACTCGAGCTCCTCGCTGCGCTCTGCGGCCGAGAGGGAAAGCCCACCCCGCTCCCGCCCCGGAGCACAAACCCCCTTCGTGCAGCCGAGCGCAGACGAGGGTCCGTCACCGGCCTGCGGCCCCTCGGGGACCAGAGGGTCGGCTGTGAGCAAGGACCCGGACAGCGCCGATGACCCACGGCCCGGCTGAGGAGAGCCATGTCACAGGAGCGTCGCCTCAGACTAGTCAAACCCACCCGTTCTGAATTCACCATCCGTGTGGCGTGTTGTTCCAGTAAAATAAAGTACCTGgttttctccccccccacccagctTGCGGTTACAGAAATCATACAAAGAACACTGAAAGGGAGCCAGACGGTGCGGTccacacagtcacagacagacagggggaGGACACCCAGACTTGGACCACAAAGCAGGAAGAAAACCAACCAAGCGGCAACAGGGACCCACAAGCCCCCCCAGCCTGACTGTTAaactatattaataatacaaaaaaacaagtcgtactaataatgaaaaataaattagtggaaAGAAGCAGTGTAGTCACGGCCCGGAGGCTCTCTGGGCCTGCGGGTCACAGTGCtctttggtggggggggggggtgcactGCGAGACTAGAGGCTCTGGTCCCTGGACTCCCACGGCTGTAGTGTGAAAACACGAACGAGGACAAACTGAGCGAAAGAACAATGAACGCAGAAGGAAATTAAAACGTCCAGGAGGAGCACGCCTGTCCTCGGCCTCCCGTCCAGCCCGTCCCGACCCGGCCCGGGGCGCCTGCCTCTGTAAAACCAGGGGCGGGATGGAGTGTGGTCCGCCGCGCGCCCCCCCCACCGGGCAGCACAGGGTCCCCCAGTGAACCCACTCCTTCCATTGCACcgtttttcttctctctctgtaaaaggttttgtgtttgttttgggcGTTTTCAGACCACAAGCTCTGCACAGACAAGGCACATGAACGAGGAGAGGCCGGAGGACGAGGGGCGCCGAGGAGGAGACGCCCAGCCCTAGGGGGGGGTCTGCGTACAGGCCCTGGGGGTTGGAGTCACACGTGCCCCGACACGGCCGTGCCCCCGAACGTGCCCACGCTGATGTCCTTGCTGCCCGCGATCATGTCCTGCAGGCTGGCCACGGCACGGCCCCGCAGCAGCTCCTCCATGCCCCGGCCCTGCTCCGCCATCTTGGAGCGCCGGCGTTTCAGCGCCCGCTTCTCGGTCCGTGTGCGGGGGGGCGGCTGGCCGTTGCAGAGGCGGGTGCAGGCCGAGATCCCGCAGAACAGGGACTCGTCGGACTGGGACGAGCCCTCACTGCTGCCCTCGGACGGGGGGCCCTTGTAGGAAGACGTGCACACCTCCCCCGACGGCAGGAAGCCGCCGTGGCAGCGGGGGCCGCCGTTAGCTACTGTTGGAGCGCCGGCGCCGGGCCGCAGGGTCTCCGTCTTCTCGGCCTTCATCTTGCAGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184875 True 3098 TUCP 0.59 2 21811732 21848136

Neighbor

gene id symbol gene type direction distance location
AMCG00005335 LOC106569412 coding upstream 53850 21756187 ~ 21757882 (+)
AMCG00005338 NA coding upstream 70904 21737684 ~ 21740828 (+)
AMCG00005337 NA coding upstream 74082 21733381 ~ 21737650 (+)
AMCG00005336 LOC106584283,LOC106613957 coding upstream 83862 21722580 ~ 21727870 (+)
AMCG00005339 ralgps2,LOC107581502,LOC107712857 coding upstream 103338 21707342 ~ 21708394 (+)
AMCG00005344 NA coding downstream 24891 21873027 ~ 21878534 (+)
AMCG00005349 LOC107687326 coding downstream 68979 21917115 ~ 21919897 (+)
AMCG00005348 NA coding downstream 72748 21920884 ~ 21928473 (+)
AMCG00005350 NA coding downstream 84230 21932366 ~ 21937327 (+)
AMCG00005356 plpp6,LOC107683852,LOC107739850,LOC107669136,LOC107712867,LOC107597802 coding downstream 172726 22020862 ~ 22024488 (+)
G146928 NA non-coding upstream 66281 21744879 ~ 21745451 (+)
G146915 NA non-coding upstream 98949 21710357 ~ 21712783 (+)
G146815 NA non-coding upstream 412761 21398676 ~ 21398971 (+)
G146782 NA non-coding upstream 482830 21326532 ~ 21328902 (+)
G146749 NA non-coding upstream 746824 21063973 ~ 21064908 (+)
G147022 NA non-coding downstream 99950 21948086 ~ 21948618 (+)
G147024 NA non-coding downstream 102192 21950328 ~ 21950587 (+)
G147027 NA non-coding downstream 108465 21956601 ~ 21957045 (+)
G147066 NA non-coding downstream 233508 22081644 ~ 22087344 (+)
AMCG00005340 ralgps2,LOC106531732 other upstream 107214 21680708 ~ 21704518 (+)
AMCG00005329 ipo13,LOC103463745,LOC105910849 other upstream 239411 21566638 ~ 21572321 (+)
G146790 NA other upstream 471020 21337432 ~ 21340712 (+)
AMCG00005280 NA other upstream 1008535 20797458 ~ 20803197 (+)
AMCG00005286 NA other upstream 1109260 20699486 ~ 20702472 (+)
AMCG00005345 NA other downstream 35063 21883199 ~ 21887568 (+)
G147021 NA other downstream 97422 21945558 ~ 21947991 (+)
G147025 NA other downstream 104433 21952569 ~ 21952882 (+)
G147029 NA other downstream 109304 21957440 ~ 21984144 (+)
AMCG00005351 NA other downstream 118722 21966858 ~ 21969692 (+)

Expression


Co-expression Network