G147024


Basic Information

Item Value
gene id G147024
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21950328 ~ 21950587 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU184985
ctgcCCAGCCCTCGTCTGCCTCCGTGTCCAGGTTGTCAAGCTCCTTCAGCTCCGTGGCACTGATGATGGACGGCCTGTCCGGGTCCTGTGGCCAGGCCTGCCCGTGGCCCTGGGGGGGGCGACCGGGAGCCCGGGGGGCCCTGCGGGGGAAAGGGGGGTTAGCGAGGGACTCGTTTGACACCTTCCGGTTTGTTCCACGGTGTTTTACCAGATTCCCAATTCCTAGTTACTGAGCTCAACTCACCCGCTCTTACGGGGAG

Function

NR:

description
PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184985 True 260 lncRNA 0.65 1 21950328 21950587

Neighbor

gene id symbol gene type direction distance location
AMCG00005350 NA coding upstream 13001 21932366 ~ 21937327 (+)
AMCG00005348 NA coding upstream 21855 21920884 ~ 21928473 (+)
AMCG00005349 LOC107687326 coding upstream 30431 21917115 ~ 21919897 (+)
AMCG00005344 NA coding upstream 71794 21873027 ~ 21878534 (+)
AMCG00005335 LOC106569412 coding upstream 192446 21756187 ~ 21757882 (+)
AMCG00005356 plpp6,LOC107683852,LOC107739850,LOC107669136,LOC107712867,LOC107597802 coding downstream 70275 22020862 ~ 22024488 (+)
AMCG00005358 NA coding downstream 73936 22024523 ~ 22031098 (+)
AMCG00005357 NA coding downstream 109622 22060209 ~ 22061467 (+)
AMCG00005364 NA coding downstream 165902 22116489 ~ 22122971 (+)
AMCG00005366 NA coding downstream 173195 22123782 ~ 22130249 (+)
G147022 NA non-coding upstream 1710 21948086 ~ 21948618 (+)
G146928 NA non-coding upstream 204877 21744879 ~ 21745451 (+)
G146915 NA non-coding upstream 237545 21710357 ~ 21712783 (+)
G146815 NA non-coding upstream 551357 21398676 ~ 21398971 (+)
G146782 NA non-coding upstream 621426 21326532 ~ 21328902 (+)
G147027 NA non-coding downstream 6014 21956601 ~ 21957045 (+)
G147066 NA non-coding downstream 131057 22081644 ~ 22087344 (+)
G147021 NA other upstream 2337 21945558 ~ 21947991 (+)
AMCG00005345 NA other upstream 62760 21883199 ~ 21887568 (+)
G146952 NA other upstream 102192 21811732 ~ 21848136 (+)
AMCG00005340 ralgps2,LOC106531732 other upstream 245810 21680708 ~ 21704518 (+)
AMCG00005329 ipo13,LOC103463745,LOC105910849 other upstream 378007 21566638 ~ 21572321 (+)
G147025 NA other downstream 1982 21952569 ~ 21952882 (+)
G147029 NA other downstream 6853 21957440 ~ 21984144 (+)
AMCG00005351 NA other downstream 16271 21966858 ~ 21969692 (+)
AMCG00005365 sec22b,sec22bb,LOC102790162,LOC108439390,LOC107676649,LOC100705437,LOC107585928,LOC107548814 other downstream 181978 22132565 ~ 22145610 (+)

Expression


Co-expression Network