G147027


Basic Information

Item Value
gene id G147027
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21956601 ~ 21957045 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU184988
AGCCAACCTGTCTCCGCCGGTCCCTTCGCTCTCCTCCGCCGCTCTGGCCGGTCCGGGCGTCTCGTACGGGTCCGCTCTCGCTCTCGGCGCGGCCGGGCGGAGCACAATAGCGAGCTGCTGCGGGGCCCTGTGCTGCCTGTCTCGCTGTCCCTGGCTGGCCGCCTGCGTCGCTCCGGTGCGCGGTGTCGGTGCCGCTGCTGTGTCCGGGGTCGGGTCGGGTCTGGAGACGCGGCGGTTCCGCTCAGTGAGGCCCCGCTCGCCGCGGCCTGTCGCACAATCAAAGATGGCAGAGCGCCAATGGACGAGCGCCTGACGTCATCGCGTCGGGACGGCGGCAGCGGGACAGAAAGCGGCTCCTCCCCTCGCCGCCTGTGACGTCACCACCGCCGTTCCTGTTCCTCCCTGGCAGCCAATCAGCGGCGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184988 True 424 lncRNA 0.72 2 21956601 21957045

Neighbor

gene id symbol gene type direction distance location
AMCG00005350 NA coding upstream 19274 21932366 ~ 21937327 (+)
AMCG00005348 NA coding upstream 28128 21920884 ~ 21928473 (+)
AMCG00005349 LOC107687326 coding upstream 36704 21917115 ~ 21919897 (+)
AMCG00005344 NA coding upstream 78067 21873027 ~ 21878534 (+)
AMCG00005335 LOC106569412 coding upstream 198719 21756187 ~ 21757882 (+)
AMCG00005356 plpp6,LOC107683852,LOC107739850,LOC107669136,LOC107712867,LOC107597802 coding downstream 63817 22020862 ~ 22024488 (+)
AMCG00005358 NA coding downstream 67478 22024523 ~ 22031098 (+)
AMCG00005357 NA coding downstream 103164 22060209 ~ 22061467 (+)
AMCG00005364 NA coding downstream 159444 22116489 ~ 22122971 (+)
AMCG00005366 NA coding downstream 166737 22123782 ~ 22130249 (+)
G147024 NA non-coding upstream 6014 21950328 ~ 21950587 (+)
G147022 NA non-coding upstream 7983 21948086 ~ 21948618 (+)
G146928 NA non-coding upstream 211150 21744879 ~ 21745451 (+)
G146915 NA non-coding upstream 243818 21710357 ~ 21712783 (+)
G146815 NA non-coding upstream 557630 21398676 ~ 21398971 (+)
G147066 NA non-coding downstream 124599 22081644 ~ 22087344 (+)
G147025 NA other upstream 3719 21952569 ~ 21952882 (+)
G147021 NA other upstream 8610 21945558 ~ 21947991 (+)
AMCG00005345 NA other upstream 69033 21883199 ~ 21887568 (+)
G146952 NA other upstream 108465 21811732 ~ 21848136 (+)
AMCG00005340 ralgps2,LOC106531732 other upstream 252083 21680708 ~ 21704518 (+)
G147029 NA other downstream 395 21957440 ~ 21984144 (+)
AMCG00005351 NA other downstream 9813 21966858 ~ 21969692 (+)
AMCG00005365 sec22b,sec22bb,LOC102790162,LOC108439390,LOC107676649,LOC100705437,LOC107585928,LOC107548814 other downstream 175520 22132565 ~ 22145610 (+)

Expression


Co-expression Network