G147121


Basic Information

Item Value
gene id G147121
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 22127907 ~ 22130549 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU185123
ATGAATGATCgcaaaagtgtttattttaaaatacagtgatgTAACAGTGACACGAGACACATGACTGGGATACAGAGAGGCAGCAGGGGTGATTTCTGCTCCACTACACTGTGCTAAGCTGTGTTACAAAGTGTTGTCTTCCATGAGACTGTGCTGTGATATAGTGCGCTGTGCCATTCTAGAGgagtgcagtgtgctgtactgtgccgTACCCTatctctccgtctctgtccTTCTCAGCTACAGCCCCGCAGGACGGTAACATTGATGTCTGCTAGACACAGGGTGAGCACAGACCCCCTACATACAGTGTCGGCTGTAGAAGCTCCTTCTTTCCctttcacttctctctctccttctccttctctctctctctcctggtctGTCCTCCAGAGTGAGCGTCTCActgtcctcttcctcttcctcctcctcttcctcctccttctgtGACCTCACCTGAGAGCCCATGGACAGACAGGGGGCCAGTTTACTCCTGTTACCTGGACATGTTTCCTCACCACAGGAGGTGTGCTGATTGCTGTCTGATGTCCCTGACTGGAGCCacgtcagtgtgtgtgtgtgtgtgtgtgtatgagcgTGCATGTGTAACAGAAGTGGTGATTTGTTGTATAGGTGATTCCCCTTGTCACTCTATTTTGCACTATTGggattttgtgtttcatttgtacCGCCTTCATCTGCCATACACTGTGTATTATTGGCTGATTTGTGTGGCCTGCTTATGAGGGGCGGTGTTTAAGTTAGAATTGTCTCAGTCTGCAAGCGCCAAACCAGTGTtcacttttgcaaggcactgtacataaacatttaattgtatactCCTAAGATCAGATTTGTGTTGATAATATTGTTTGTAAATATTTCCATTATGTTATGCATGAGATGTGGCATTTTGTGCATGTGTATTCTGTCGAATATCCTTGTTTTTAGATTGCTAGCTAGCGCGAGATTGCGTCAGTAATGGAGTCTCATGTATTTTGTACAGTGTATGTATGCAGAGGTGATGGTCTGTGGCTGCATCCTGTCATTTGCCTTTCCTTTGTTTCTGACCAGATCATCCAGTAAAGCAATGACTGGTGGTACATGCTGGAGTCCTGTTGCTGTTTATTAAAAACCATACATAACGCAAGAAGAGTACCGTCACacatgcgtgtgtgtctgtgtctgtgtgtgtgtctgttcctCACCTTCAGTGCACTGGTAAAGGGGGCAGCAGTTCCCAGGGACCCCTGTGCCCTTGGAGATGAGCTGGCTGTGCCAACCGGGTGGGCAGGAGGGGCTGGCGCAGCGCTTAAAGTCACAGGTGCAGAAGCTGGGCACCAGGGGGCAGCAGTCCCCTACAGGCGTGTAGGCTTTAGTCAGGAAGGAGTCCAGCGGGCAGGACGGCACCGTCTTGGTCGGGCAACTGATGTTACGGCACTGCTCaagcactgacagacagacagggagacacaTTCACTCGAATTTCTTAACTGCTGGCGTATcggcgtgtgagtgtgtgattgtgtgagtgtgattgtgtcagtgtgagtgtgtctgtgtgtgattgtgtcagtgtgtctgtgtcagtgtgtgtgtgattatgtcagtgtctgtgtgtgattgtgtcagtgtgattgtgacagtgtgtgtgtgtgtgtctgtgtcagtgtgtgtgtgtctgtgtcagtgtgtgtgtgattatgttagtgtctgtgtgtgattgtgtcagtgtgattgtgtcactgtgagtgtgtcattgtgtgtgatTATGTCAGTGTCAGTTtgattgtgtcagtgtgtgtgtgtgtgtgtgtgtgtgtgtctcacacAGCTGGTCTTCGCATTCGTCCACAGTGAGGAGGCGTGGCTGGGCAAAGCAGCTCCtctcctgacacacacagcgaCCCTCTGTCAGCTCACACCTCTGGTGAGTACACGGCACAGGCTtactctctgtctcactctgcTGAAGAGTGGGATCGTAGTCCATAAATTCtTCAGTACTTCCCAGCACTTCTCATAACTGCTGTAGGTGAAGGAGCCAAAGCAGGTCTGCTCAGAGTAACAGTCACAATTGCCAACCCTCACACCGCAGCCCCAAACCCACGGGCACAGATCGTCCTCCCATGGGTCCCGCTTCACCCCGGGCAGCTCTGTACACAGGGGGCACAGTCAGTGGGCtgcacaggaacacacacagtacacacacagtaaacacacacacacacacacacacacacagagcacagcacacaccCCTGTCCCGAAACTTTAATAGGTGCATTTACAAGGCCATTAACTTTCAGCCGCCATAGGGGTCTCA

Function

GO:

id name namespace
GO:0006325 chromatin organization biological_process
GO:0008213 protein alkylation biological_process
GO:0043414 macromolecule methylation biological_process
GO:0006479 protein methylation biological_process
GO:0016569 covalent chromatin modification biological_process
GO:0016570 histone modification biological_process
GO:0016571 histone methylation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185123 True 2326 TUCP 0.50 2 22127907 22130549

Neighbor

gene id symbol gene type direction distance location
AMCG00005367 edem3 coding downstream 15653 22104142 ~ 22112254 (-)
AMCG00005359 NA coding downstream 40154 22086294 ~ 22087753 (-)
AMCG00005360 NA coding downstream 49080 22061733 ~ 22078827 (-)
AMCG00005361 NA coding downstream 132392 21982801 ~ 21995515 (-)
AMCG00005352 NA coding downstream 167406 21959594 ~ 21960501 (-)
AMCG00005369 NA coding upstream 15237 22145786 ~ 22146079 (-)
AMCG00005368 imp3,LOC107709332 coding upstream 16498 22147047 ~ 22158405 (-)
AMCG00005382 fam78b,LOC106584378,LOC106613832,LOC105894228,LOC107717547,LOC103376640 coding upstream 85410 22215959 ~ 22223377 (-)
AMCG00005374 LOC103372724 coding upstream 233045 22363594 ~ 22368062 (-)
AMCG00005375 trabd2a coding upstream 263765 22394314 ~ 22395422 (-)
G146951 NA non-coding downstream 320601 21806980 ~ 21807306 (-)
G146891 NA non-coding downstream 521372 21589996 ~ 21606535 (-)
G146857 NA non-coding downstream 566446 21560049 ~ 21561461 (-)
G146813 NA non-coding downstream 746338 21381306 ~ 21381569 (-)
G146702 NA non-coding downstream 1270105 20857600 ~ 20857802 (-)
G147122 NA non-coding upstream 1717 22132266 ~ 22180932 (-)
G147156 NA non-coding upstream 98650 22229199 ~ 22229991 (-)
G147184 NA non-coding upstream 292440 22422989 ~ 22423230 (-)
G147185 NA non-coding upstream 295176 22425725 ~ 22426106 (-)
G147109 NA other downstream 26045 22036595 ~ 22101862 (-)
G147108 NA other downstream 42963 22083717 ~ 22084944 (-)
AMCG00005362 rgl1,LOC107657943,LOC107750730,LOC107717560 other downstream 72940 22030825 ~ 22054967 (-)
AMCG00005363 NA other downstream 145386 21971035 ~ 21982521 (-)
AMCG00005343 NA other downstream 380109 21745544 ~ 21747798 (-)
G147124 imp3,LOC107671714 other upstream 15152 22145701 ~ 22158415 (-)
G147143 NA other upstream 64817 22195366 ~ 22198768 (-)

Expression


Co-expression Network