G147124 (imp3,LOC107671714)


Basic Information

Item Value
gene id G147124
gene name imp3,LOC107671714
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 22145701 ~ 22158415 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU185128
GTTTTGCCACGGCCTGGAGGGCAGCGGACATTTTGGAGTAGCGCTGCAGTGACTGCCGTAGTTTGCGTCgcgttgtgcagtgtgtgcagtattcAGTGGGTGCTCAGGGTACAGCCGGCAGCCATGGTGCGGAAGCTGAAGTTTCATGAGCAGAAGCTGCTGAAGAAGGTGGACTTCCTGAACTGGGAGGTGGACAACAACCTGCACGAAGTGAAGGTGCTGCGCAGATACCACATCGAGAGGAGGGAGGACTACACAAGTACAATAAGCTGAGCCGCAGTATTCGGGAGCTGGCCCAGAAGATCCGGGACCTGAACGAGAAGGACGGCTTCCGAGCGCAGAGCACGGCGCGGCTGCTGGAGAAACTGTATGGCGTGGGTCTGATTCCCACCCGGGAGAACCTGGCGCTCACCGAGAAGGTCACCGCCTCCGCCTTCTGCAGgagGCGCCTGCCCAGTGTGCTGGTGAAGCTGCGCATGGCCCAGAACCTGAAGACCGCCGTGACCTTCATCGAGCAAGGCCATGTGCGCGTCGGACCCGAGATCATCACTGACCCTGCCTTCCTGATCACCAGGAGCATGGAGGACTTCGTGACCTGGGTGGACTCCTCCAAGATCAAACAGCACGTCATGAACTACAACGAGCAGAGAGACGATTTCGACCTGGTGGTGTGATGGAGCCGGtccagcgtgtgtgtgtgtgtttgtgtgtgtgagcgtaTATGTATGTGAGCGTGTGTGTCTAGCGGAGAGGAGTTGTGAAGTTGGCCGGACGGTGAGCCACACCTCCTCTGCGGTGACGGAGACGGAGCTGCAGAATCGCCCCCCCAGCCCAGATGCTGCATCTCTGGCGCCGGACCCACTCTGCCCAGGATGACTCCGTGGTCCCCCTGTGGTGGGGGGCGTCTATGATGTGCAGGTCCAAGTCCGAgggcccccccacccccagcctgGGCCCTGGCGGTCGTTCATGGGCTCATAGAGACACTGGGGGGCCTTCCTGGCCGCTGCGTGTTCACAGTCCAGTCGGGCGGGGTCGCGGCCTCTCAGTCTCCATGTTCAGGAGTCCAGATGTTGTTCAGCTGCTGACTGGACGCCCCAGTCATGCCATCCTTTATCAACTGCAATAAAATCTGCCGAGAGGCCTGTGTTGTGTCAGTTactgctgtgtctgtttgtttcccTGAAGTgtaaaggtgtgtgtgtctgtggtgg

Function

symbol description
imp3 Predicted to enable snoRNA binding activity. Predicted to be involved in rRNA processing. Part of Mpp10 complex. Orthologous to human IMP3 (IMP U3 small nucleolar ribonucleoprotein 3).

NR:

description
PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185128 True 1214 TUCP 0.59 7 22145701 22158415

Neighbor

gene id symbol gene type direction distance location
AMCG00005367 edem3 coding downstream 33447 22104142 ~ 22112254 (-)
AMCG00005359 NA coding downstream 57948 22086294 ~ 22087753 (-)
AMCG00005360 NA coding downstream 66874 22061733 ~ 22078827 (-)
AMCG00005361 NA coding downstream 150186 21982801 ~ 21995515 (-)
AMCG00005352 NA coding downstream 185200 21959594 ~ 21960501 (-)
AMCG00005382 fam78b,LOC106584378,LOC106613832,LOC105894228,LOC107717547,LOC103376640 coding upstream 57544 22215959 ~ 22223377 (-)
AMCG00005374 LOC103372724 coding upstream 205179 22363594 ~ 22368062 (-)
AMCG00005375 trabd2a coding upstream 235899 22394314 ~ 22395422 (-)
AMCG00005373 NA coding upstream 258505 22416920 ~ 22422016 (-)
G146951 NA non-coding downstream 338395 21806980 ~ 21807306 (-)
G146891 NA non-coding downstream 539166 21589996 ~ 21606535 (-)
G146857 NA non-coding downstream 584240 21560049 ~ 21561461 (-)
G146813 NA non-coding downstream 764132 21381306 ~ 21381569 (-)
G146702 NA non-coding downstream 1287899 20857600 ~ 20857802 (-)
G147156 NA non-coding upstream 70784 22229199 ~ 22229991 (-)
G147184 NA non-coding upstream 264574 22422989 ~ 22423230 (-)
G147185 NA non-coding upstream 267310 22425725 ~ 22426106 (-)
G147121 NA other downstream 15152 22127907 ~ 22130549 (-)
G147109 NA other downstream 43839 22036595 ~ 22101862 (-)
G147108 NA other downstream 60757 22083717 ~ 22084944 (-)
AMCG00005362 rgl1,LOC107657943,LOC107750730,LOC107717560 other downstream 90734 22030825 ~ 22054967 (-)
AMCG00005363 NA other downstream 163180 21971035 ~ 21982521 (-)
G147143 NA other upstream 36951 22195366 ~ 22198768 (-)

Expression


Co-expression Network