G147143


Basic Information

Item Value
gene id G147143
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 22195366 ~ 22198768 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU185150
tggtatgaaaaaaaaaagactttatTCGTTTTCATTCATctatcttttttatatataaaagtaaacGTTTTCTTTAAAATCTTGTAAAGGAGACCCTTCTGTGAGGCGAGAGAATGATAAACTACTTCATATAACATGAACAAGCACTTAGTAAACAACGACACGACAAGGATACACTTTTAGAAATACATcagtttatatacagtacaaatcCAAGAGCTCCGACGTGAAGCCGCCACATTCTCCTCCTGCGGCCGCGTCCGCCTCCGGGGCCCCACCTGCGCCTCGGGGCCGGGGCGGGACACTGCAGGGCAGCGCAGTCAGAGAGGACACACAGAGGCCCGTCTCGGCCGCTCGATCGTGATTGGATGCGTCTAGAGAGGAGGGCTGGCCGCGTGTAGTGTCTGTCACGAGTAACGTCCTAAATACTGCAGGGCCGCCCCGGGGTGAACACAGGGGGCAATTAACACCCGCAGGCCGTGGGCGGAGGGCAGTTCCAGTCCTCAGGGGCCGAAGGGGTTTCTGGGTTGCAGGGCTTTAGTGACCGGATTGAGCTGCGGAGGGGACACCCTTAACCCCCGAGGGCCCGGGGCCGCTCTCCGCCCAGCGCTGCGCCGCGGCCGGCCTGGCTCCGGAGACGCGCAGTAAGAGCTTTTAAACGATTGTCGTAACTATTTGCTCAAACAAATGTCTCTGAACATTCAGTAAGACTCTGGAGTACCTTTGTTTTCTTAGagagagattatatatatatatataaaaaaatcaaccaCAGCCAACTCTGCAGTTTGAACAGACAGGatgaaatatttactttgttctCTCAACATTCGTAGGTTCGTCCATCTTTCGTTACCATTTTAAAACTTGaaccagaacaaaaaaaacaacaactgttgATCAgataaaacagattttcaaacattttgtttagCTTGGCTTTTAAAAATCACAGGATCATTAAACAACAAAACGAAAGCAAAGACATCAGTGAgtgatttagaaaaaaaaatgatgaaaacaatgAGAGATAACTGTAAAACAGGAGCAATGTacactgaaacaaatacaatagtatttatcaaatataaatgataataatatagtattatagtaataaaaacaactgtaaaagCTTCTTTAATGTGGTACTGCTGTACAGGAGTCCAGTTATGCATGCTTTGCTTTAGCAGGAGAATGCGCTAATTAACCAATTTCGTAAAgccaattattcaattaacaacTGTGAGCCCAGGGTGGAACACAGCGGGGCTGCAGGAGTCTACAAACTCGAgttgctcttcctcctcctcctcctcacctacTGCTCTAGTTTGGCCGTTCGGCTCGGCAGGAACTCCCGATGTGTCAGCTCCCGATGTGGCAAAGCGCCGAGAGAAAGgacaatgaaaatacaattcaaaatacaaataactgaaaGATAATAGGCAGCACTGGGTTgtccccacctcctcctcctcttcctcctctcgtTCACAGCACCGGCGTCTCCGATGATAAACGCAAATTCATGTTTATTCAGAcagttgtgtgtttgcagtggaAAGACCCAGCAGCCCGACTCACACCGATACAGAAAgtcatcatcatcctcatcatctTCAACATCACAACAGCTCCGCTATCCGTCGATGCAGCAGGAGGACGGACTGTAACGCGCTTGCTTTGAATAATCGTGCTCAGAAGGACAAGTGTGAGCGGTGCTGTCCGGAGAGGGGGTCCCAATTCAGTCTCGTTGCCCCGTTTAGCCCCCAGACTCTGCACCCGGGGGGGGGCGGGGCAGATCAGTGCACAGGAGCCTCTGGagcaattgtgtgtgtgtgggggggtattgCTCGTCTGTTGATGATCCGCGTGTCCGGGTGTGCGTCTCGCTCCTCTTCGATCGGGACCCCGTCTCTCTCCGTCCCAGAacaacagtaacagtaacagtacaACAGTGGCGTCACGCTCGGCTCTGCGGGTCACTGACCAGACAGACAGAGCGGAGGGGCGGCGGAGGGAGAGGGGCAGCGGTCCGTCCACGGGGCGCAGTCTCTCCTCAGCCCGGGGGGCGCACTAGGCGTACACGTGCATGCCGCGGCGGTGCCAGAGGAGGAGGCGTGGCCGGGGGTGCCCTCGGAGCCGGCGCCGGTGCCGTAGCTGTGCTGGGAGGGGGGCGTGGGGTACTTATCCACCGGGCTCTGCAGGGTGTGGTAGGGGGGCAGCGCTCTCTGGGCGTCGGGGGGGTGCTGGGACAGCAGGGCGGCCTGCACATCCGTCAGCTGGTACATCATGTTCTGGACACAGTGCTGCGGCGGCGGCTGATTGGCCGGCTGGCCTCCCGACATCATCTGAAAGGTGACGATGGGCGGCAGCTGCTCGCGCGACATGCTAACGCTCATGGGGGACATCATGCCCCCCGGCAGCATGGTGCCGCCGCCCTGGTGGGCGTGGGGGTGCGACAGCGAGTGTGGGTGCTGGAGCAGGCCGGGGTGCTGGCCGCCCACCTGATGGGGGTGCAGCATGCCGAACATGTGGCCGTAGCCGGGCTTGGGCAGCCCCATCCAGTCGCACTGGCCCTGCCCCTGCCGGCCCACGCCCATGCCCTGCGACAGCATCTGGGACACGGGCGGTAGCAGGGGCCCCCGGGGGGCCGCGGTGGAGGCGGCGGGCGCAGCGGGGCACAGCGCGCCGGGCGGGGAGGTGGCGTCGGACACGTAGGCATGCGGCGACTCCAGGGACTCGACGGGCGACAGCGTGACGGAGCTCTCCGACAGCGCGGCCTTGGCCTCGGCCCCCTGCGTCTTCTTCCGGCGCCGGACCTTCGCGTCCTTGGGTTCCTTAGCTGGGCCGGGGCCCCCGCCCGCCCCGTGGAGGGCCTTAGCGCCGGGGTTGGCTCGGCGGCTCTTCTTGCCCTGGGGCCCCGGCCGCATGCCCAGGAAGGCCCCGTTGGCGCCGCAGACCAGCGGGGACAGGCCCGCCCCCCCCAGGTGCGCGTGGGGGCTGTGCACCAGGTTGTACTCGTCCAGCAGCCGCACGATGTCGTGGTGCATGCGCTCCTGCGCTGTGTCGCGCGGCAGCCGGTCCAGGTGGTCGGTGATGTCGCGGTTGGAGAAGTGGTCCAGCAGCACCTGGGCCGCCTCGAAACTGCCCTCCCGCGCCGCCAGGAACAGGGGTGTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185150 True 3186 TUCP 0.57 2 22195366 22198768

Neighbor

gene id symbol gene type direction distance location
AMCG00005368 imp3,LOC107709332 coding downstream 36961 22147047 ~ 22158405 (-)
AMCG00005369 NA coding downstream 49287 22145786 ~ 22146079 (-)
AMCG00005367 edem3 coding downstream 83112 22104142 ~ 22112254 (-)
AMCG00005359 NA coding downstream 107613 22086294 ~ 22087753 (-)
AMCG00005360 NA coding downstream 116539 22061733 ~ 22078827 (-)
AMCG00005382 fam78b,LOC106584378,LOC106613832,LOC105894228,LOC107717547,LOC103376640 coding upstream 17191 22215959 ~ 22223377 (-)
AMCG00005374 LOC103372724 coding upstream 164826 22363594 ~ 22368062 (-)
AMCG00005375 trabd2a coding upstream 195546 22394314 ~ 22395422 (-)
AMCG00005373 NA coding upstream 218152 22416920 ~ 22422016 (-)
G147122 NA non-coding downstream 14434 22132266 ~ 22180932 (-)
G146951 NA non-coding downstream 388060 21806980 ~ 21807306 (-)
G146891 NA non-coding downstream 588831 21589996 ~ 21606535 (-)
G146857 NA non-coding downstream 633905 21560049 ~ 21561461 (-)
G146813 NA non-coding downstream 813797 21381306 ~ 21381569 (-)
G147156 NA non-coding upstream 30431 22229199 ~ 22229991 (-)
G147184 NA non-coding upstream 224221 22422989 ~ 22423230 (-)
G147185 NA non-coding upstream 226957 22425725 ~ 22426106 (-)
G147124 imp3,LOC107671714 other downstream 36951 22145701 ~ 22158415 (-)
G147121 NA other downstream 64817 22127907 ~ 22130549 (-)
G147109 NA other downstream 93504 22036595 ~ 22101862 (-)
G147108 NA other downstream 110422 22083717 ~ 22084944 (-)
AMCG00005362 rgl1,LOC107657943,LOC107750730,LOC107717560 other downstream 140399 22030825 ~ 22054967 (-)

Expression


Co-expression Network