AMCG00005387 (tmem132e)


Basic Information

Item Value
gene id AMCG00005387
gene name tmem132e
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 398920 ~ 400797 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005387
ATGGCGTTTGTGGACAGCGCTACCAGAGATCCGACCCAGAGCACTTGGAGTGCACAGCTCGCCTTCTTCCTGCGGGAGACGCGGGCGGAGCCACCGGGCAACCAGAGCGGCAACCTCCTCCAGCGCTCCGAGAGCTTCGTGGTGTTCCAGACCAAGGAGCTCCCGGTGGTCAACGTCACCTTTGGTCCTTTCTCCCAGGGCCAGAGGCTCTCCAAAGACTTGCTGCAGCCCTCCAGCCCCCTGGACATCCCCGGCTGGCTGACGGTCAACTGGAAGGTGCGGGCCTTCATCGTCCAGCCGCGTGTCTTCTCCAGCAACCCCGTGGTGCAGGTCCTCTTCTATATCGCCGGCCGAGACTGGGACGACTTCAAGGTGTTGGACAAGCTGCCCTGCATCCGCCTCCACGCCTTCCGGGACGTCCGGGAGATCAAGACGTCCTGCCGGCTGCGGGGGGACCTGGCGCGCTGCCTGGCTCAGCTGGAGCTCCCGGCGACATGGTTCAACACCAATGTGGCACCCCTGGGCCGGCGCAAGGGCGTGGAGGGCATGGAGATGAGCGGCGAGACCCTGCAGGCGGAGCTGTACTACACGGTGCACGAGGCCGACGGCAGCGGCGAGTGCGGAGACAATTCCCCCCGCAGAGGGGCAGCCCGGGGCGAGGTGCCCACCCAGCACCCTCTCCTACGCATCGGCAGCATCAGCCTGTACCAGCCCAGCCAGGAGCAGATGATGGTGGACAAGCAGCTGGACAAGAACATGTTCCTGCGCCTGCCAGAGAAGCCACTGAAGCCCGGGGAAATCCTCAGCATCAAGCTGTTCCTGGTGCCCAACTCCACCGTGGAGCAGTTCACCCTGAAGTAA

Function

symbol description
tmem132e Acts upstream of or within auditory receptor cell development; detection of mechanical stimulus involved in sensory perception of sound; and posterior lateral line neuromast hair cell development. Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 99. Orthologous to human TMEM132E (transmembrane protein 132E).

NR:

description
PREDICTED: transmembrane protein 132E isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005387 True 861 mRNA 0.65 2 398920 400797

Neighbor

gene id symbol gene type direction distance location
AMCG00005391 NA coding downstream 23908 350765 ~ 375012 (-)
AMCG00005395 lig3,LOC102796838,LOC107587693,LOC105924869 coding downstream 131230 260508 ~ 267690 (-)
AMCG00005394 tmem248 coding downstream 147747 248099 ~ 251173 (-)
AMCG00005396 NA coding downstream 166545 227258 ~ 232375 (-)
AMCG00005401 doc2b,LOC107681901,LOC107685552 coding downstream 247806 148035 ~ 151114 (-)
AMCG00005388 NA coding upstream 470360 871157 ~ 873005 (-)
AMCG00005454 NA coding upstream 570874 971671 ~ 973719 (-)
AMCG00005474 NA coding upstream 613855 1014652 ~ 1021117 (-)
AMCG00005476 mdh2,LOC106908802,LOC103136570 coding upstream 622238 1023035 ~ 1027249 (-)
AMCG00005475 porb,LOC107728227,LOC107598574,LOC107703971,LOC108424088 coding upstream 635299 1036096 ~ 1051408 (-)
G151972 NA non-coding downstream 21207 377355 ~ 377713 (-)
G151970 NA non-coding downstream 48598 346997 ~ 350322 (-)
G151957 NA non-coding downstream 66576 242154 ~ 332344 (-)
G151903 NA non-coding downstream 362525 35722 ~ 36395 (-)
G151901 NA non-coding downstream 366109 31994 ~ 32811 (-)
G151979 NA non-coding upstream 289862 690659 ~ 690942 (-)
G152071 NA non-coding upstream 597557 998354 ~ 1009739 (-)
G152085 NA non-coding upstream 664662 1065459 ~ 1070656 (-)
G152178 NA non-coding upstream 996544 1397341 ~ 1398392 (-)
G152197 NA non-coding upstream 1057440 1458237 ~ 1458662 (-)
AMCG00005400 doc2b,LOC105895337,LOC107681901 other downstream 278373 108398 ~ 120547 (-)
AMCG00005399 NA other downstream 299250 94352 ~ 99670 (-)
AMCG00005407 polr2j,LOC107587688 other downstream 331887 62355 ~ 67033 (-)
G152133 NA other upstream 818530 1219327 ~ 1335440 (-)
AMCG00005419 NA other upstream 970545 1371342 ~ 1376473 (-)
G152277 NA other upstream 1105143 1505940 ~ 1507628 (-)
G152271 NA other upstream 1120945 1521742 ~ 1615497 (-)
AMCG00005461 eif4h other upstream 1307886 1708683 ~ 1723500 (-)

Expression


Co-expression Network