AMCG00005393


Basic Information

Item Value
gene id AMCG00005393
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 257084 ~ 258802 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005393
ATGGCGTGTCACAACGCCAGGGACAGGATCGCGGCCTCGACACGGCCCAGCCGCGCTGCGACACGTGTTCATTCGCCATTCTCTCCTCAGGTGACCAACCATGCCACGCAGGACGGCGGTGGGGGGGTGCGGGCGGGGCTGGGGCGGTCCTGGAGCCACGTCCCTCGGACCCGTGTCCTCCTGCAGCGCACGGAGAGGCCCGGTGCCCGGCCCAGCGGACGGCGCTCCGCCACGCTGGTCAAGTCCTCCCGGCAGGTGCGGTTCGGGCGGGAGTGGGAGTCTGGGTGGGGTTTCAGTGAGGCTGCTATAAAACACCCAGACACCCAGTGGATGAGAGACTCAGCAGCCGACCCAGCTCAGGCAGGAGCTGGACCTGAGTGCCTGGACCTAGCCCCCAGGGGAGGCCGTGGAGCGGGACGGCTGACTGGGCCCGGGACCAGCCCTAAGGAGGACCAGAGGGGAACTGACAGAGCTTCTCCCCCTTCGTTGTCACTCCGACGAAACGGAAGATGTGAAGAGATAACTGTGTAA

Function

GO:

id name namespace
GO:0005657 replication fork cellular_component

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005393 True 531 mRNA 0.67 3 257084 258802

Neighbor

gene id symbol gene type direction distance location
AMCG00005392 NA coding upstream 38 255058 ~ 257046 (+)
AMCG00005402 NA coding upstream 165557 90255 ~ 91527 (+)
AMCG00005403 NA coding upstream 175815 76221 ~ 81269 (+)
AMCG00005404 NA coding upstream 181515 68283 ~ 75569 (+)
AMCG00005448 NA coding downstream 620165 878967 ~ 904620 (+)
AMCG00005451 NA coding downstream 648026 906828 ~ 925853 (+)
AMCG00005452 NA coding downstream 667396 926198 ~ 933420 (+)
AMCG00005449 LOC107103649 coding downstream 676932 935734 ~ 947232 (+)
AMCG00005453 NA coding downstream 694428 953230 ~ 956421 (+)
G151941 NA non-coding upstream 8965 175252 ~ 248119 (+)
G151938 NA non-coding upstream 145675 108376 ~ 111409 (+)
G151896 NA non-coding upstream 220691 35764 ~ 36393 (+)
G151889 NA non-coding upstream 237269 19538 ~ 19815 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding downstream 96779 355581 ~ 355860 (+)
G151964 NA non-coding downstream 101291 360093 ~ 360292 (+)
G151968 NA non-coding downstream 277093 535895 ~ 536692 (+)
G151978 NA non-coding downstream 431857 690659 ~ 690936 (+)
G152040 NA non-coding downstream 755276 1014078 ~ 1014380 (+)
G151967 NA other downstream 140123 398925 ~ 399865 (+)
G151969 NA other downstream 277949 536751 ~ 537363 (+)
G152159 NA other downstream 1108212 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 1117666 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 1250700 1509502 ~ 1517580 (+)

Expression


Co-expression Network