Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00005396 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 227258 ~ 232375 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00005396 | True | 621 | mRNA | 0.64 | 5 | 227258 | 232375 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005401 | doc2b,LOC107681901,LOC107685552 | coding | downstream | 76144 | 148035 ~ 151114 (-) |
| AMCG00005398 | NA | coding | downstream | 120760 | 104130 ~ 106498 (-) |
| AMCG00005397 | gatsl2,LOC106567563,LOC106603747 | coding | downstream | 136875 | 80442 ~ 90383 (-) |
| AMCG00005406 | NA | coding | downstream | 165935 | 54208 ~ 61323 (-) |
| AMCG00005408 | bckdk,LOC107681895,LOC107685622 | coding | downstream | 173839 | 42629 ~ 53419 (-) |
| AMCG00005394 | tmem248 | coding | upstream | 15724 | 248099 ~ 251173 (-) |
| AMCG00005395 | lig3,LOC102796838,LOC107587693,LOC105924869 | coding | upstream | 28133 | 260508 ~ 267690 (-) |
| AMCG00005391 | NA | coding | upstream | 118390 | 350765 ~ 375012 (-) |
| AMCG00005387 | tmem132e | coding | upstream | 166545 | 398920 ~ 400797 (-) |
| AMCG00005388 | NA | coding | upstream | 638782 | 871157 ~ 873005 (-) |
| G151903 | NA | non-coding | downstream | 190863 | 35722 ~ 36395 (-) |
| G151901 | NA | non-coding | downstream | 194447 | 31994 ~ 32811 (-) |
| G151891 | NA | non-coding | downstream | 206702 | 20300 ~ 20556 (-) |
| G151957 | NA | non-coding | upstream | 9779 | 242154 ~ 332344 (-) |
| G151970 | NA | non-coding | upstream | 114622 | 346997 ~ 350322 (-) |
| G151972 | NA | non-coding | upstream | 144980 | 377355 ~ 377713 (-) |
| G151979 | NA | non-coding | upstream | 458284 | 690659 ~ 690942 (-) |
| G152071 | NA | non-coding | upstream | 765979 | 998354 ~ 1009739 (-) |
| AMCG00005400 | doc2b,LOC105895337,LOC107681901 | other | downstream | 106711 | 108398 ~ 120547 (-) |
| AMCG00005399 | NA | other | downstream | 127588 | 94352 ~ 99670 (-) |
| AMCG00005407 | polr2j,LOC107587688 | other | downstream | 160225 | 62355 ~ 67033 (-) |
| G152133 | NA | other | upstream | 986952 | 1219327 ~ 1335440 (-) |
| AMCG00005419 | NA | other | upstream | 1138967 | 1371342 ~ 1376473 (-) |
| G152277 | NA | other | upstream | 1273565 | 1505940 ~ 1507628 (-) |
| G152271 | NA | other | upstream | 1289367 | 1521742 ~ 1615497 (-) |
| AMCG00005461 | eif4h | other | upstream | 1476308 | 1708683 ~ 1723500 (-) |
