AMCG00005403


Basic Information

Item Value
gene id AMCG00005403
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 76221 ~ 81269 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005403
CGGTCCTCCGTGTACGCGAATAGCTGTGAGGTCATAGGTCAGAGTGCAGAGGTTACAGACATGGCCGCCCCCGTGTAGAAACATGACTGATGTGAGCGACGTTACTCGGGCTGTCGGGCGGACTCAGAGTTAACCGCGACGAGGAGAAGGTCGGTGCGGTTTAAATTACTTCACAAGAAAGGACGTTTCGCGGAACGCGAGTGTCCCCAGCCAGCCACCGTCCGTGGAAAGTGAGCCGCTGCCCCCATGTCTGTGGCGACGGCGCGGCTGCTGTGTGCCCGGAGCTGCGCAGCGCTGGTCCGGCGGGGGTTCGCCTCTCCCCGGGGGGCACAGAGCGAGGGTCCGGCGCAGGAGGGCCCGGTGTTCCAATATGTGGGCCAACGCACACGGCCCAAGGATCGGGTCTTCGTCTGGGGCTTCAGCTACTCTGGCGCTCTGGGCGTCCCCAGCTTCGTGGTGCCGGACAGCGGGAGGAAGACGCCCAAGAAGTACCAGCTCACCCCCTACCGCCTGGAGACGTTTGAGAGGATCTCCTCGGCAGCCTGTGGATATGGTTTCACCCTGCTGGCGTCTCGCACCCAGGACCTGAGCAAAGTGTGGGGCATGGGCCTGAACACGGACTCCCAGCTCGGCTTCCAGCGTTCCCAGCATGACCGCAaCACGAGCTATGACTACGTCCTGGAGCCGTCGCCTGTTGCTCTGCCCCTGGAGCGGCCCCAGGAGACAAGGGTGGTGCAGGTGTCCTGTGGCCGGGCACACGCGCTGGTCCTCACTGACTCCGAGGGGGTGTTCAGCCTGGGCAACAACGCGTACGGGCAGTGCGGGAGGGCCGTGGTGCCGGGGGAGATCTACGGCAGCAGCCACCGCGTCCACCGGCTGCAGGGTTTCCACTGCCGAGTGGTGCAGGTGGCGTGTGGACAGGATCACAGCCTGTTCCTGACGGAGGATGGCCAGGTGTACGCCTGCGGATGGGGGGCGGACGGCCAGACAGGACTGGGGCACCACGACGTGGCCCCCTGGCCAGTGCGCCTGGGTGGGGCGCTGGCGGGGGTGCAGGTGAGGCAGGTGACGTCGTACGGAGACTGCAGCCTGGCTGTGTCCCAGGAGGGGGCGCTGTACGGCTGGGGCAACTCGGAGTACCTGCAGCTGTCCGCTGTGACCGAGGCCACACAGatcAACACTCCACAGCGCCTCCGTCTGGAGGGAGTGGGCCCGGTGCAGCAGGCGGCCTGTGGCGGCACGCAGGTGGCAGTGCTGAACGACAAGGGGGAGGTGTTCGTGTGGGGCTACGGGATCCTGGGGAAGGGGCCCAACCTGTCGGAGTCCAGGACCCCGGAGATGATCCCGCCCACGCTGTTCGGCCGCAGCGAGTTTAACCCCACGCTGGCTGTGACGCAGGTGCGCTGTGGGCTCAACCACTTTGCCGCCGTCACAGATCGAGGGGAGCTGTTCGTCTGGGGCAAGAACGTGCGCGGCTGTCTGGGCATCGGCAAGCGGGACGATCAGTACTTCCCCTGGAGGGTGACTGTGCCTGGCCGGGTGGTGGACGTGTCGTGTGGAGTGGACCACATGGTGGCGCTGGTCAAGTCTCTGCTGTGATGCACCCCGACCCCACTGCCCACAGCCCCTCCCAACCCCAACCCATGGCCCCCCGAGACCTGCCGTCCTTCACCTCAgtctgtgagagtgagtgagtgtgcgttTCTCTCTCTGGGAgggagtgcgtgtgtgtgtccgtgtcccAGGCTGGCCGTCTCCTTATCACTCTACCTGACTTGTGAGGCGTCGTCTCGAGTGTGCGCACATAAACGCACCGACTGCCGGCGGTTTACGAATGTACCcgttttggtgtttttcttgTCTGTGTGGCCGGTGTCCTGTGCGTCGGCTTGGGCTgtccagtccagttcagtccCTCCTGCAGAGCCTCGACCTGATCAACCGCACACACCGCTCGGGGTCACCGGCCTCTGGGACATGTGGAGTCGCGGTCAGACGAGCGCCAGCCTCCAGCGCGTTGACACACGGCCCCAGAGCGCCGGGGTCTGTGGCCCTGCGCTCCCGGACAGTTTTGCTCATTGACTGTGTTCACAGCATCACACGATTACAATTCCAGTGTTCCCATTAATGGGAGTTCTCcataaaacattcaataaataataaattattgttaaaGACACGCAGGCTCTCCGGCAGCTTTAATTTcgtctttatttttctttgccacacgattcattcattttcattctgtCCGACGGACCGGGCCGCCGTCTCCCTGAAGCGCGACTGCTCTCGGCTCACATCCGCTCGGGATTGGGAGATGGAGGCGACCGCGTTTtcacagccccccacccccccatcccgtcaccccccaacacacacagccctgggGCGTCAGGGTGGGTGAGGGGTGCGGGCGGGGGATCACACGGAGCCCAGAGACCAGGGATGGAGGCGCTATCAGGGTACATTCATCTTCTAGCAGCAACGGTTTTTATCTATTAGTGCACAGAGCCCTGCTATCATTACTGAAACGTCTGCGTATAGGacgaggaaaaagaaaaggacaatcCCGGGTTAGTAAAGGGTTCCAGCCGAGGGGCTTCTCCCACACAGCGGCCCTCCCTCAGGGATGGGGGTCTCCCGGCTGTGCTGCCGCTCTCAAGGCCGAGGAAAAGCTACCGATATGATATCGCCAAGAGTGGGCGTTTATCTCGAACCGGGGCCCATGGCAGCTGCACAAAACCTCCGTCTCCTGCCCTTTGCAGCAACGACACCCCCACAGAACTGACGATAGTGATcatttcatacaaaacattaaaggaCGAGGCAGTGGCGGCCCTCCAGGCAGGGAGGGTGGGACCAGTTCGTCCGGACGAAAGGGTCGGAGAGAACGATCACAATTAGTGCGTTCAAACCAGGCTTCCCACCGGCCAGGCGCGGCCGTGGCCCCCCCGGCCCACGTTATCGCCACCGCAACCATCTGCACATGTACCGATACACCCCCCCCACAGCTTAGAG

Function

GO: NA

KEGG:

id description
K23495 RCC1L; RCC1-like G exchanging factor-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005403 True 3021 mRNA 0.62 11 76221 81269

Neighbor

gene id symbol gene type direction distance location
AMCG00005404 NA coding upstream 652 68283 ~ 75569 (+)
AMCG00005402 NA coding downstream 8986 90255 ~ 91527 (+)
AMCG00005392 NA coding downstream 173789 255058 ~ 257046 (+)
AMCG00005393 NA coding downstream 175815 257084 ~ 258802 (+)
AMCG00005448 NA coding downstream 797698 878967 ~ 904620 (+)
AMCG00005451 NA coding downstream 825559 906828 ~ 925853 (+)
G151896 NA non-coding upstream 39828 35764 ~ 36393 (+)
G151889 NA non-coding upstream 56406 19538 ~ 19815 (+)
G151938 NA non-coding downstream 27107 108376 ~ 111409 (+)
G151941 NA non-coding downstream 93983 175252 ~ 248119 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding downstream 274312 355581 ~ 355860 (+)
G151964 NA non-coding downstream 278824 360093 ~ 360292 (+)
G151968 NA non-coding downstream 454626 535895 ~ 536692 (+)
G151967 NA other downstream 317656 398925 ~ 399865 (+)
G151969 NA other downstream 455482 536751 ~ 537363 (+)
G152159 NA other downstream 1285745 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 1295199 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 1428233 1509502 ~ 1517580 (+)

Expression


Co-expression Network