AMCG00005404


Basic Information

Item Value
gene id AMCG00005404
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 68283 ~ 75569 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005404
CGGCGGCCTGTGGTGGAGGACACTGCAGGTGGAAGGCAGAGATATTAAAGAGAGGCACAGTGCCTGAGCGGCTATATTACTGCTCTGCTATcaagacacgcacacacagacagacatctGAACTCCTGCGTCCGTCACCATGGGGGAGACTTACATTCGTCACATGGAGCTTCTGGGTTTTGAGAGGCGATTCTTTCCCAGCCAGCACTACGTGTACATGTTCCTGGTGAAGTGGAGTGACCTGAAAGAGAAGCTGATCTACAGGAAATATCCAGACATCTACACTTTCCACAAATCCCTGAAGGAGATGTTCCCCATCGAGGCGGGAGACATCGACTCCAAGGACCGCATCATCCCCCACCTGCCAGGTACGCCCTCGCCCAGTCCGCCCGGGCTCCCGACCCGTCAGGGCACGCTGGCTGGGTACTGCCAGGCCCTGCTCAGCCTGCCGCCCAAGATCTCGCGCTGCCAGCTGCTTCTGAGCTTCTTCCAGGTGCAGCCGGAGGACGAGACCCCGCCCGCGCCACACCCGTTTAAGAAAAATGAGACCTACCTGATGTCCAAGGACAACTCGAGGAGCAACACGTCAGAGATCACTGGCCCCATCATCCTGGAGAGCTACAGGGCCATCGGCGACTACAGCAAGGGCACCAAGTACGAGCTGAGCCTGCACACTGGCGACACTGTGGAGGTGGTGGAGAAAAGCCCGAACGGCGAGCTGTACATCACCATCAAGGCCTACACTGCAGCCCAGGAGGACGAGCTGACGCTGGCGGAGGGAGAGACCATAGAGGTCATTCACAAGCTGCTGGACGGCTGGTGGGTGAGCATCCACTCGCAGCGGCGCCAGCGCATCACCCAGGACACCTACCGCCGGAACAGCCGCCGCTACCTGCAGCAGCGCAGCCAGCGCCGGCCCCTCGTGGCCACACAGCCCCCCCTGCAGGAGAAGCGCAGCAACAACGGAAACGGCGACCTCGTGACCTCCAGGCCCGCCCCCGCCTCCCAGGAGTCCGGTAACAGGCTGCCGTCCGTGCCCCCCCGCCCCAGCCACGAGCTCATCATGGAGCGCTGCACTGAGATCACCCGCAAGAAGGCCAGCTTCCGCTCCGCCAGCTGAGATGGCACCCCCACGGCCCGGAGGACCACCGCCGCGCCCAACGCACCGGCACAGTGGGCTTCACCAGAGCGACTCTGATCTCGATGTGTCTGGAGTGATGCAGTGCAATGCGTTTAGACTAGAGGCCGAGATAATTTATTCttgttctctctgtgtgttgaCATTACGTTGTTTACTCGTATTACTGTTCAGCTGCCTAAGCTAGAGGTTGTGTCGTGGGTTCGCAGTGTTGCGTTGGAGTTTTTCTTCTGAGGGCGAGGGGCGAGAGCTGAGGGACTGAGAGACACCgggagtctgtctgtgtgtgcagagagcagcagcaacagcaatgATGCCAGAATACTATCCTATTCACATTGCTTTGGCTTTTTCTTGTACATAAACTATTTTGTACTCTTACCCTTAATAcccttaataaaaacaacagcagcagcagcgcaaACAGCCTGGGCAGAGTGGCGCAGTCCTGCCACTCCTCGGACAGGGTGGCGCTGGAAGTGCATGGGCAGGGAGCGCTGTGTGAAGCCAGAGACCATGAATGCCTCTTCTCTGTATATCGCTTatactgtattaaatgtatCGTTTATTCCTG

Function

GO: NA

KEGG:

id description
K08011 NCF1, P47PHOX; neutrophil cytosolic factor 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005404 True 1712 mRNA 0.58 9 68283 75569

Neighbor

gene id symbol gene type direction distance location
AMCG00005403 NA coding downstream 652 76221 ~ 81269 (+)
AMCG00005402 NA coding downstream 14686 90255 ~ 91527 (+)
AMCG00005392 NA coding downstream 179489 255058 ~ 257046 (+)
AMCG00005393 NA coding downstream 181515 257084 ~ 258802 (+)
AMCG00005448 NA coding downstream 803398 878967 ~ 904620 (+)
G151896 NA non-coding upstream 31890 35764 ~ 36393 (+)
G151889 NA non-coding upstream 48468 19538 ~ 19815 (+)
G151938 NA non-coding downstream 32807 108376 ~ 111409 (+)
G151941 NA non-coding downstream 99683 175252 ~ 248119 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding downstream 280012 355581 ~ 355860 (+)
G151964 NA non-coding downstream 284524 360093 ~ 360292 (+)
G151968 NA non-coding downstream 460326 535895 ~ 536692 (+)
G151967 NA other downstream 323356 398925 ~ 399865 (+)
G151969 NA other downstream 461182 536751 ~ 537363 (+)
G152159 NA other downstream 1291445 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 1300899 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 1433933 1509502 ~ 1517580 (+)

Expression


Co-expression Network