Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00005417 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 1299366 ~ 1300547 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K19374 | DNAJC30; DnaJ homolog subfamily C member 30 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00005417 | True | 1182 | mRNA | 0.69 | 1 | 1299366 | 1300547 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005389 | NA | coding | downstream | 187476 | 1109601 ~ 1111890 (-) |
| AMCG00005473 | NA | coding | downstream | 236571 | 1059253 ~ 1062795 (-) |
| AMCG00005475 | porb,LOC107728227,LOC107598574,LOC107703971,LOC108424088 | coding | downstream | 247958 | 1036096 ~ 1051408 (-) |
| AMCG00005476 | mdh2,LOC106908802,LOC103136570 | coding | downstream | 272117 | 1023035 ~ 1027249 (-) |
| AMCG00005474 | NA | coding | downstream | 278249 | 1014652 ~ 1021117 (-) |
| AMCG00005427 | ppm1e,LOC102780278 | coding | upstream | 131357 | 1431904 ~ 1436308 (-) |
| AMCG00005428 | rad51c,LOC107691693 | coding | upstream | 161685 | 1462232 ~ 1467875 (-) |
| AMCG00005426 | NA | coding | upstream | 179629 | 1480176 ~ 1485828 (-) |
| AMCG00005440 | NA | coding | upstream | 216936 | 1517483 ~ 1523285 (-) |
| AMCG00005439 | hip1,LOC102790400 | coding | upstream | 223113 | 1523660 ~ 1536868 (-) |
| G152085 | NA | non-coding | downstream | 228710 | 1065459 ~ 1070656 (-) |
| G152071 | NA | non-coding | downstream | 289627 | 998354 ~ 1009739 (-) |
| G151979 | NA | non-coding | downstream | 608424 | 690659 ~ 690942 (-) |
| G151972 | NA | non-coding | downstream | 921653 | 377355 ~ 377713 (-) |
| G151970 | NA | non-coding | downstream | 949044 | 346997 ~ 350322 (-) |
| G152178 | NA | non-coding | upstream | 96794 | 1397341 ~ 1398392 (-) |
| G152197 | NA | non-coding | upstream | 157690 | 1458237 ~ 1458662 (-) |
| G152320 | NA | non-coding | upstream | 392202 | 1692749 ~ 1693555 (-) |
| G152335 | NA | non-coding | upstream | 445406 | 1745953 ~ 1752738 (-) |
| G152344 | ywhae,LOC105005922,LOC106567579 | non-coding | upstream | 640476 | 1941023 ~ 1946800 (-) |
| AMCG00005400 | doc2b,LOC105895337,LOC107681901 | other | downstream | 1178819 | 108398 ~ 120547 (-) |
| AMCG00005399 | NA | other | downstream | 1199696 | 94352 ~ 99670 (-) |
| AMCG00005407 | polr2j,LOC107587688 | other | downstream | 1232333 | 62355 ~ 67033 (-) |
| AMCG00005419 | NA | other | upstream | 70795 | 1371342 ~ 1376473 (-) |
| G152277 | NA | other | upstream | 205393 | 1505940 ~ 1507628 (-) |
| G152271 | NA | other | upstream | 221195 | 1521742 ~ 1615497 (-) |
| AMCG00005461 | eif4h | other | upstream | 408136 | 1708683 ~ 1723500 (-) |
| AMCG00005532 | NA | other | upstream | 896807 | 2197354 ~ 2329684 (-) |
