AMCG00005425


Basic Information

Item Value
gene id AMCG00005425
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 1403046 ~ 1406537 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005425
CAGGCGGTGAACTCCCTGGTTGCGCAAGGCGAGCTTCCAGCGCATAGCGGCCCGCAGAGCAGCTGCTGTCACTGCAGTCCTCGCAGATCCACACTGACCAGCCGCAGCGATGGCAGCGATGGCAGCGATGGCAGCTCAGGCCCTTCTGCTTCTCCTGGTGTGCGCGGCGGGGGCTCGGACGGCGCTCCTCCAAGAGGAGCCGCTGAGGGCGGAGGTGCGGGTGATGCACGGGGACAGCGAGCTGTTCGTGGGCGACAGGGTGACCCTGCGGTGCAGCGTCCCCGGGCATCCCTCAGGCTGGAGCTACAACTGGTACAAGGCGGGCGTGCCGCTGGTGGGGTACAGCAACACGGGCAGCATGTACACCCTGAGGGCAGTGTCGCCCCTGCAGAGCGGCCCCTACGCCTGCCAGGGCCAGAGGAGAGGAACCGGACCCCAGCGCACCCAGCTCAGCCCGCCTCTCTACGTACGGGTGTGCGGAGGCTGGGTGAGCCTGCAGGCGCCCCTCCAGCCCGTGATTCTGGGCCGGGAGATGACCCTAAGCTGCCGTGTTCGAGGCAACCCGAGGCTGGAGGAGGTGGTCTTCTACAAGGACGGCCGGGAGCTCCAGCGCAGGCCCCACCCCCAGCTGCACCTGTCCCGCCTCTCCTACCAGGACGAGGGAGCCTATTGGTGCCGGGCCTCCTGGGGCCAACAGTGGCGCTGGAGCTCCGCACAGTCGCCGGCGGTTCAGGTGTCAGTCAAAGAGATGCTGACAGAACCGGTGCTGGAGGTGCTGACAGGGGTCCCGGCCttgagggggagagagatgatCCTGTCCTGCTCGGCACAGCTGATCGTGGCCCGGCCCGGGCTCCGGCTGCGATACAGCTTCCGCAGGAACGACCACAGACTGGCGGTGGACAGCTCCGAGGACACGCACACCGTCCTGCAGGCTGACCGCAGAGATGCAGGGGACTACCAGTGCAAAGTGACGGTGGACGGGCTGGGCCTGGCCAAGTGGAGCAACAGTGTGCAGGTGGAGGTGATGGATGAGGAACCTGTGAAGACGGAGGTCCCACACGTCACGCCGACCGTGGCTGTCGAAACCCAGACGGTGGAGCTCTCCTCATCACCCCCCAACTGGACGGAGCTCCCCCCATTAGCCCCTGACTGGGCAGAGTCCTCCTCGCTGGACACTGACTGGACAGAGCTCTCGCCGCTGGACACCGAGACTGAGGACACCCACCCGGTCCTCTCTGCCCGAGACGCGGAGGACGTGTTCAACGACACCGAGAGCCTGTCCACCACCTCCCACCGGGGCTGGGCCACGAACCTCACGAGCGACACGGCGCCGTTCCCAGAGAGTGAGCCGCTGCTGGACACTGAGGAGCAGAGGGGCCTGAATCAAACCTCCTCTGTCTATTAAGCAGTGTGAGCCCAGGTCCTCCGCAGCCGGCGAGTGTCCTATACTCTGTGTGAATTGCCTAACCTGCTTCCTGCGATGATGTAGCCAATCACAGTAATAAAGTCTGTTGAAGTCA

Function

GO: NA

KEGG:

id description
K06498 FCGR1A, CD64; high affinity immunoglobulin gamma Fc receptor I

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005425 True 1523 mRNA 0.65 6 1403046 1406537

Neighbor

gene id symbol gene type direction distance location
AMCG00005424 LOC106567664 coding upstream 345 1388688 ~ 1402701 (+)
AMCG00005413 kctd7 coding upstream 18456 1381741 ~ 1384590 (+)
AMCG00005416 LOC108240947,LOC106533470 coding upstream 43523 1342760 ~ 1359523 (+)
AMCG00005412 NA coding upstream 80451 1321808 ~ 1322595 (+)
AMCG00005414 wbscr22 coding upstream 97974 1301037 ~ 1305072 (+)
AMCG00005422 trim37,LOC103132205,LOC106941548 coding downstream 1896 1408433 ~ 1425336 (+)
AMCG00005423 NA coding downstream 62639 1469176 ~ 1480171 (+)
AMCG00005437 NA coding downstream 79676 1486213 ~ 1490622 (+)
AMCG00005436 smg8 coding downstream 84934 1491471 ~ 1496565 (+)
AMCG00005435 NA coding downstream 90315 1496852 ~ 1506717 (+)
G152111 NA non-coding upstream 149087 1245031 ~ 1253959 (+)
G152053 NA non-coding upstream 345651 1057185 ~ 1057395 (+)
G152040 NA non-coding upstream 388666 1014078 ~ 1014380 (+)
G151978 NA non-coding upstream 712110 690659 ~ 690936 (+)
G151968 NA non-coding upstream 866354 535895 ~ 536692 (+)
G152196 NA non-coding downstream 51617 1458154 ~ 1458747 (+)
G152198 NA non-coding downstream 55187 1461724 ~ 1461939 (+)
G152397 NA non-coding downstream 848828 2255365 ~ 2323345 (+)
G152644 NA non-coding downstream 1665413 3071950 ~ 3090655 (+)
G152655 NA non-coding downstream 1777284 3183821 ~ 3186988 (+)
AMCG00005418 NA other upstream 23744 1376468 ~ 1379302 (+)
G152159 NA other upstream 35090 1367014 ~ 1367956 (+)
G151969 NA other upstream 865683 536751 ~ 537363 (+)
G151967 NA other upstream 1003181 398925 ~ 399865 (+)
AMCG00005434 NA other downstream 102965 1509502 ~ 1517580 (+)
G152267 NA other downstream 339423 1745960 ~ 1748934 (+)
G152337 NA other downstream 393274 1799811 ~ 1803903 (+)
AMCG00005429 ywhae,LOC106567579,LOC105005922 other downstream 522918 1929455 ~ 1946800 (+)
AMCG00005481 dynll2a,LOC107554284,LOC103397138 other downstream 1097373 2503910 ~ 2510676 (+)

Expression


Co-expression Network