Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00005440 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 1517483 ~ 1523285 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00005440 | True | 549 | mRNA | 0.64 | 3 | 1517483 | 1523285 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005426 | NA | coding | downstream | 31655 | 1480176 ~ 1485828 (-) |
| AMCG00005428 | rad51c,LOC107691693 | coding | downstream | 49608 | 1462232 ~ 1467875 (-) |
| AMCG00005427 | ppm1e,LOC102780278 | coding | downstream | 81175 | 1431904 ~ 1436308 (-) |
| AMCG00005417 | NA | coding | downstream | 216936 | 1299366 ~ 1300547 (-) |
| AMCG00005389 | NA | coding | downstream | 405593 | 1109601 ~ 1111890 (-) |
| AMCG00005439 | hip1,LOC102790400 | coding | upstream | 375 | 1523660 ~ 1536868 (-) |
| AMCG00005438 | NA | coding | upstream | 47468 | 1570753 ~ 1574756 (-) |
| AMCG00005445 | fzd9,LOC106567714,LOC106612580,LOC107713270,LOC107691950,LOC107709816 | coding | upstream | 112460 | 1635745 ~ 1637496 (-) |
| AMCG00005446 | NA | coding | upstream | 136742 | 1660027 ~ 1666365 (-) |
| AMCG00005447 | LOC106580668 | coding | upstream | 151959 | 1675244 ~ 1685460 (-) |
| G152197 | NA | non-coding | downstream | 58821 | 1458237 ~ 1458662 (-) |
| G152178 | NA | non-coding | downstream | 119091 | 1397341 ~ 1398392 (-) |
| G152085 | NA | non-coding | downstream | 446827 | 1065459 ~ 1070656 (-) |
| G152071 | NA | non-coding | downstream | 507744 | 998354 ~ 1009739 (-) |
| G151979 | NA | non-coding | downstream | 826541 | 690659 ~ 690942 (-) |
| G152320 | NA | non-coding | upstream | 169464 | 1692749 ~ 1693555 (-) |
| G152335 | NA | non-coding | upstream | 222668 | 1745953 ~ 1752738 (-) |
| G152344 | ywhae,LOC105005922,LOC106567579 | non-coding | upstream | 417738 | 1941023 ~ 1946800 (-) |
| G152424 | NA | non-coding | upstream | 644319 | 2167604 ~ 2175954 (-) |
| G152452 | mate4,LOC107718064,LOC107718062,LOC107699952,LOC106604060 | non-coding | upstream | 771548 | 2294833 ~ 2318672 (-) |
| G152277 | NA | other | downstream | 9855 | 1505940 ~ 1507628 (-) |
| AMCG00005419 | NA | other | downstream | 141010 | 1371342 ~ 1376473 (-) |
| G152133 | NA | other | downstream | 182043 | 1219327 ~ 1335440 (-) |
| AMCG00005400 | doc2b,LOC105895337,LOC107681901 | other | downstream | 1396936 | 108398 ~ 120547 (-) |
| AMCG00005399 | NA | other | downstream | 1417813 | 94352 ~ 99670 (-) |
| AMCG00005461 | eif4h | other | upstream | 185398 | 1708683 ~ 1723500 (-) |
| AMCG00005532 | NA | other | upstream | 674069 | 2197354 ~ 2329684 (-) |
| AMCG00005517 | NA | other | upstream | 883240 | 2406525 ~ 2410247 (-) |
| AMCG00005491 | supt6h,LOC107603297 | other | upstream | 1349221 | 2872506 ~ 2890448 (-) |
| G152645 | NA | other | upstream | 1548575 | 3071860 ~ 3090714 (-) |
