AMCG00005453


Basic Information

Item Value
gene id AMCG00005453
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 953230 ~ 956421 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005453
GCGTTGCTCTCACGGGTTTCGTCCTGGCGTGTGGTCTGTCTGCCTGCAGTGCCCTACTCTCCCGAAGTCTCTCCTCTCAACATCGCCGGCCGCATCACCAGCACCACCATGGTTCTCCGGCAGCCGCTGTGCTACTTCGAAAACCTCGCAAGCCTCCCCTGCAGCGTGGATCAGTGTGAGATCTGGCTGGTTGTGGCCAGAAATAATGGTCTGCAAAACTTTGATAACATTAAAGGAAACCGCAACATAGTGTCTCAGTCTCCGTACCCCAGAGCTTTTGAGAGCGCCTCGTCTCCCAACTACTTCCTGACCAAGCTCGGTGTCCAGGCCAGCTTCCCCTGCGCCGAGCTGTTGGGCCTCCGCTACTTCCAGGTCGGAGCTGAAGGCAACTGCACTTCCTCGAACTGCAACGGGTTTCTGCCCTTTGCTTCGACTGTCAGCGTGAAGTTCATCCTGGTTAGCCCTGTGTTCAGTGTGATGGTCTCTGAAACGCCGTGGTCTCAGTCCATCACTCTGATAGCACGTAAGCTCCCTCTTGCGCTTTCAAAGCCCAGCTCCTCGCTGGATGATCGGATGGGGAGGAGGTCTGCAGGGATGATCGTCATTACAACCATCGCTTCCTGTCTGCTGGctgtcctgctgctgctgctgctgtccgtCCTGCTGCTGCGCTGCTGTGCGTTCTCCCAGGGAAAGCACAAGATCACGTCTCCCCCCTGCCGGGGCTCCCTCAGACGGTACCGCACACACAACCTGAACAATCCCGACTACAGCAACTTACACATCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005453 True 789 mRNA 0.57 5 953230 956421

Neighbor

gene id symbol gene type direction distance location
AMCG00005449 LOC107103649 coding upstream 5998 935734 ~ 947232 (+)
AMCG00005452 NA coding upstream 19810 926198 ~ 933420 (+)
AMCG00005451 NA coding upstream 27377 906828 ~ 925853 (+)
AMCG00005448 NA coding upstream 48610 878967 ~ 904620 (+)
AMCG00005393 NA coding upstream 694428 257084 ~ 258802 (+)
AMCG00005450 NA coding downstream 1579 958000 ~ 962580 (+)
AMCG00005468 ap2b1,LOC103360248 coding downstream 17209 973630 ~ 984375 (+)
AMCG00005472 NA coding downstream 28269 984690 ~ 984959 (+)
AMCG00005471 NA coding downstream 30210 986631 ~ 986935 (+)
AMCG00005470 NA coding downstream 30927 987348 ~ 987707 (+)
G151978 NA non-coding upstream 262294 690659 ~ 690936 (+)
G151968 NA non-coding upstream 416538 535895 ~ 536692 (+)
G151964 NA non-coding upstream 592938 360093 ~ 360292 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding upstream 597370 355581 ~ 355860 (+)
G151941 NA non-coding upstream 705111 175252 ~ 248119 (+)
G152040 NA non-coding downstream 57657 1014078 ~ 1014380 (+)
G152053 NA non-coding downstream 100764 1057185 ~ 1057395 (+)
G152111 NA non-coding downstream 288610 1245031 ~ 1253959 (+)
G152196 NA non-coding downstream 501733 1458154 ~ 1458747 (+)
G152198 NA non-coding downstream 505303 1461724 ~ 1461939 (+)
G151969 NA other upstream 415867 536751 ~ 537363 (+)
G151967 NA other upstream 553365 398925 ~ 399865 (+)
G152159 NA other downstream 410593 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 420047 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 553081 1509502 ~ 1517580 (+)
G152267 NA other downstream 789539 1745960 ~ 1748934 (+)
G152337 NA other downstream 843390 1799811 ~ 1803903 (+)

Expression


Co-expression Network