Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00005456 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 2083234 ~ 2089877 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0015807 | L-amino acid transport | biological_process |
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0015179 | L-amino acid transmembrane transporter activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00005456 | True | 687 | mRNA | 0.66 | 4 | 2083234 | 2089877 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005486 | NA | coding | upstream | 27643 | 2049048 ~ 2055591 (+) |
| AMCG00005487 | NA | coding | upstream | 39946 | 2016016 ~ 2043288 (+) |
| AMCG00005430 | NA | coding | upstream | 174524 | 1897877 ~ 1908710 (+) |
| AMCG00005457 | NA | coding | upstream | 337367 | 1740671 ~ 1745867 (+) |
| AMCG00005459 | NA | coding | upstream | 349165 | 1724009 ~ 1734069 (+) |
| AMCG00005455 | LOC106612657 | coding | downstream | 9167 | 2099044 ~ 2120874 (+) |
| AMCG00005527 | pitpnab,LOC108410689,LOC105890453,LOC101470402,LOC100703534,LOC103045464 | coding | downstream | 68085 | 2157962 ~ 2170629 (+) |
| AMCG00005528 | NA | coding | downstream | 84188 | 2174065 ~ 2200981 (+) |
| AMCG00005530 | nle1,LOC107720672 | coding | downstream | 112552 | 2202429 ~ 2209490 (+) |
| AMCG00005529 | sebox | coding | downstream | 123336 | 2213213 ~ 2215285 (+) |
| G152198 | NA | non-coding | upstream | 621295 | 1461724 ~ 1461939 (+) |
| G152196 | NA | non-coding | upstream | 624487 | 1458154 ~ 1458747 (+) |
| G152111 | NA | non-coding | upstream | 829275 | 1245031 ~ 1253959 (+) |
| G152053 | NA | non-coding | upstream | 1025839 | 1057185 ~ 1057395 (+) |
| G152040 | NA | non-coding | upstream | 1068854 | 1014078 ~ 1014380 (+) |
| G152397 | NA | non-coding | downstream | 165488 | 2255365 ~ 2323345 (+) |
| G152644 | NA | non-coding | downstream | 982073 | 3071950 ~ 3090655 (+) |
| G152655 | NA | non-coding | downstream | 1093944 | 3183821 ~ 3186988 (+) |
| G152656 | NA | non-coding | downstream | 1109455 | 3199332 ~ 3200187 (+) |
| G152657 | NA | non-coding | downstream | 1170333 | 3260210 ~ 3260429 (+) |
| AMCG00005429 | ywhae,LOC106567579,LOC105005922 | other | upstream | 136434 | 1929455 ~ 1946800 (+) |
| G152337 | NA | other | upstream | 279331 | 1799811 ~ 1803903 (+) |
| G152267 | NA | other | upstream | 334300 | 1745960 ~ 1748934 (+) |
| AMCG00005434 | NA | other | upstream | 565654 | 1509502 ~ 1517580 (+) |
| AMCG00005418 | NA | other | upstream | 703932 | 1376468 ~ 1379302 (+) |
| AMCG00005481 | dynll2a,LOC107554284,LOC103397138 | other | downstream | 414033 | 2503910 ~ 2510676 (+) |
| G152588 | rpl23a | other | downstream | 755340 | 2845217 ~ 2849608 (+) |
| AMCG00005498 | lyrm9,LOC102789908 | other | downstream | 1176497 | 3266374 ~ 3270844 (+) |
| AMCG00005538 | NA | other | downstream | 2192640 | 4282517 ~ 4305156 (+) |
| AMCG00005546 | acaca,LOC107691719 | other | downstream | 2470336 | 4560213 ~ 4563020 (+) |
