AMCG00005463


Basic Information

Item Value
gene id AMCG00005463
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 1004963 ~ 1013393 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005463
CCGGGGCCGAGGGGCACCCAAGGGCGCGTACCCTCACTGAGCCGTGCACCTGGTCCGCTGCGCCTGCGTGGGCGGTGCCAGGCGAGTGAGGGATTATTTTCCCGGAGTTTCATTCTGGGGGCGCCATCAGACGGGCTGTGCGAGCTGCTGACGCCGGAGCTCCGGCTCTCTCTCCATCCTCTCCTCCGCAGAAAGGCAGCGGTGTCTCCGGCACAGCTGCACCACAGCCGGGGCTACTCTTGCCACCGCCGGACACCACAGCCCTGTGCCCGCACTCTCCGCAAGCTTCACACGCACCAGGGAAGCACCCAGACCCCGCTTGCAGCCCGTCCGTTCCACCGCAGGTGCTACGTGCAGCAGCTTCTCAAATTAGCCCGAGCCAGGGTGCGCTCGGTGGCGGTCGGGGGCGGCGGCCTATGAATGGGACGGAGGCGTGGCCGCTGCTCGGCGCCCCGGTGACTATGTGTGGCCCGGGCCAGCCTGCCGACCTGAATGCACTGGCCGGTGGTCTGGGAGGGCGGGGAGCGGGCAGGTGGCCGGGGCCGAGGCGGGGGCATGGCCAGCCCCTTCAAGATCGCGGTGCTGGGGGCGCAGGGCGTGGGCAAGACCGCGCTGGTGCGTCGCTTCCTCTACAACGAGTACAGCGAGGCGGCGCCGCCCCAGCCCGCCCCCAGCCCCGCCCGCCACGTCTACCTCCCCGCCGCCGTGCTCAACGGACACGTGCATGACCTGCAGATCACGGACTACCCCGCCATCCCCTCCTTCCCCGGGAGCACCCTGCAGGAGTGGGCCGACTCCTGCTGTCGGGGGGTCCGCAGCGCTCATGTCTACATCCTGGTCTACGACATCTGCTGTTTCGACAGTTTCGAGTATGTGAAGACCATCCGCCAGCAGATCCTGGAGACCAGGGTGGTAGGCACAGTGGAGGCGCCCATCCTGATCGTGGGCAACAAGCGGGACCTGCAGCGTGGCCGCGTCATCCCCCGGCACAACGTGTCCGACCTGGTACGCAAGACCTGGAAGTGCGGCTACATCGAGTGCTCGGCCAAGTTCAACTGGCacgtgctgctgctgttcagcGAGGCGCTCAAGTGCGTGGGCTGCAGCCGCTGCAAGCACGTCCACGCCGCCATCCGCTTCCAGGGTGCGCTGCGGAGGGAGCGCTGCGCCCTCATGTGACCCTGCAGGGACGTGCCCGCCTGCCCACCTGACCGCCCGACCAAGGGACCGGCCAAGCAATCACCCGGCACGGGCGCCCTTTTGGCTCTCAAGTTCAcgtagtgtttgtttgtttgctctttCTTGCGTCAGTTTGGTCTTGTGGTCCTTTGTGTCCTGGCGGTTGGACAGTGGACCGATTCCCCTGGATCCTCCGTGAACCCAGGTTTAAGATACAGTCCTGATCTTCCCAATAACACTGGAGAGAGGAGGATTTCTCCACAAGGCCTCTCTGGGGTCCAGCAGGGTCGGTGTGTTCTGGACACCCCGGGTGATGGGACATTGCCGTGCTGAGGAGTGGGAGGCTGAGCGGGAGGGGAGCAGCGCTGGGGTAGCGGCTGCCGGTGGGCGGTGTGCGCAGAGACGGCTTAATCCAGTGTCCCTCGCGTGCCGGTGCTCCTGTGTGTCAGCAGCGTTGGGGCCGGAGCGGGCGAGGGGATGGCAGTGAGGCCGGCGAGGGGGGATGTTGGGAGTACTGTGGGAGGCCTGTAGATTTGagtcctgttttgttttttattgtctcTCTACAAAAGCTCCCGCCTCCCCGACACCTGCCTGGGGTCCCGTCTCTGTGTGtaagatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgcttgtgcgtgtgtgtaatgACTTGGCTGAGCCAGAAACGGGCATCTGTGCGAGAGTGTCCGCCTCACCTGTGACCGCCTCTACTCATGAAGAAGGGCTGAGGGCCcacagaattttgtttttgttttttgtttacaagGATTGTGTTAAGAGTGGATTGTGGATTGAAGTGGCAAAAAGTATGACGACGCACCAGGTGTGACGAGGTCCACAGTGTGCCGGAGCGGGACTGACACAGCTGGAGCGGGACTGACACAGCTGGAACACGATGCTTCAATAAAACCTTTGACCCGCAGTGCGTTCCGTCTCTTTGGAGTTTCTCAGCCGCAGGTGAAGTGGAGAGGGTGAAGGCGACACGGTGTGTTCTACCCAGGTGCCCCTGTGCCCGCGCCCTCCTGCCCAAGTGCCCCCATGATCCAGTGGGGCAGGTGTCTCTCAAGCGTGACCCACATCAGTCCTGGGAGTCCTGTGAAGAATTGGTTCAGTTACCATGTTAACATCCCTGACAGAAAAGCCTCCCAGCCTGTGGgctcacatttttaataaatgtattattgttgtttagtGTGGTTATTCCAGCCAGCGGGGCTTCAGTCACCTCTCCCTTCTCTccacctctctttctcttccatcttgtccccctctcccttcctgccccctccccctctctcgctGCAGCGCCGCTCTGCCAGCCCCCTCCTCGGTGCCGCTGCCCTTCAAGGACACTTCTCTCCTTTGTCCTGGATAATCAATTccaatcaattttaattacagGCTGGCGCTGAGCGATCGCACGCGCTCGGTGTGGCAGCCAGCTGGcagacaggaggagg

Function

GO: NA

KEGG:

id description
K07851 RASL10B; Ras-like protein family member 10B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005463 True 2673 mRNA 0.62 5 1004963 1013393

Neighbor

gene id symbol gene type direction distance location
AMCG00005469 ap2b1,LOC107681897,LOC106603458 coding upstream 6129 988627 ~ 998834 (+)
AMCG00005470 NA coding upstream 17256 987348 ~ 987707 (+)
AMCG00005471 NA coding upstream 18028 986631 ~ 986935 (+)
AMCG00005472 NA coding upstream 20004 984690 ~ 984959 (+)
AMCG00005468 ap2b1,LOC103360248 coding upstream 20588 973630 ~ 984375 (+)
AMCG00005467 NA coding downstream 13805 1027198 ~ 1030499 (+)
AMCG00005465 NA coding downstream 17486 1030879 ~ 1036031 (+)
AMCG00005466 NA coding downstream 50097 1063490 ~ 1072241 (+)
AMCG00005464 NA coding downstream 59659 1073052 ~ 1081418 (+)
AMCG00005390 NA coding downstream 69765 1083158 ~ 1090681 (+)
G151978 NA non-coding upstream 314027 690659 ~ 690936 (+)
G151968 NA non-coding upstream 468271 535895 ~ 536692 (+)
G151964 NA non-coding upstream 644671 360093 ~ 360292 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding upstream 649103 355581 ~ 355860 (+)
G151941 NA non-coding upstream 756844 175252 ~ 248119 (+)
G152040 NA non-coding downstream 685 1014078 ~ 1014380 (+)
G152053 NA non-coding downstream 43792 1057185 ~ 1057395 (+)
G152111 NA non-coding downstream 231638 1245031 ~ 1253959 (+)
G152196 NA non-coding downstream 444761 1458154 ~ 1458747 (+)
G152198 NA non-coding downstream 448331 1461724 ~ 1461939 (+)
G151969 NA other upstream 467600 536751 ~ 537363 (+)
G151967 NA other upstream 605098 398925 ~ 399865 (+)
G152159 NA other downstream 353621 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 363075 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 496109 1509502 ~ 1517580 (+)
G152267 NA other downstream 732567 1745960 ~ 1748934 (+)
G152337 NA other downstream 786418 1799811 ~ 1803903 (+)

Expression


Co-expression Network