AMCG00005467


Basic Information

Item Value
gene id AMCG00005467
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 1027198 ~ 1030499 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005467
GCAGGACGAGTGACGTCACGGCTTGGTAACTGAAGAGCGTCCACGGCGACGACAGAGACAGAAACGTCATTGTTATTAATCTGAAGCTACAACAGCGAATAGAAAACACCCCAAAGCCGTCACACCACATTTAAAACGCGCTGCTGCGATGGCTGGTGTGGTGCTTTGTGAGGCCACAGACCTCTACAACATCCTGAATCAGGGCGCCAGGGTCAGCAGCCTGGCAGAGTCCAATTACCTGCTCTTGATCGACGCACGCACTAAACAGGAGTACGACGAGAGCCACGTCCTCATGGCCAAGAGGTCCAAACGCGATGCGAACGGCGACTTTGTGATCCCTGCGTGCGTGGAGGTGGAGAGCATGCGCTACTGCGTTGTGTACGACGGCCACGCCGGCTCCGTGGAGGACTGCGCAGCACCGCCCACTGACACCAGCGGTCCCCACAGTCCAGTCTGGGGCTCTGCTCACCGTGACGCACAGCTGCTGCAAACCAGGAGCActcttgttgtgtgtgttgtgtggtggAGGTGGGGCCCTGGTGACAGTGTCCCCGTGGGCTGTTGTATAGGCCCGGCTGCGGAGTGCGCGGCAGTCCTGGAGCAGTGCAGCCGGAACCCAGTGCAGATCCTGAGGGGCGGCTACGAGGACTTCTCCGCCTGCTACCCCTTCCTTCGCACCCAGAAGATCCTGTATAGCCCCCAGGTGCATCCTTGCGACGCTGCCCCGCACGGCCCTGATCTCACCCCCGCAGACCCACTGCTCTCTGCGGATTTGGAGCTCGAGGAGCTGAGGCCCCACCCAGTGGAGATCCTGCCAGGACGGCTGTATATGGGGGACCGGACACAGGCCTCGGACCAGCAGGTTCTCAAAGACCTTAAGATAAAGGCGCTGGTTGATGTCTCGGGAGAGCCCAGCAGCGCGCTTATAGGAAGTGGCTGTGAGGTCCTCGCCTCTCCTCCCGCAGACTCTGTAGAGGAGGATCTCTCCGGCTTTTTCCAAGAGGCGTGCAGGTTTACAGACGTCCAGCTCGGCGCAGGGGCCTCGGTGCTGCTGTTCTCCTGCCGGGGTGTGAGCCACTGCAGCGCCATGGCCATGGCTTTCCTGATCCACCATCTGAGATGCACACTGCAGGCCAGTGCCCCCCGCCCCGCCTCTTTCCGGCTCTACCTCCGTTTCACACAGCAGGGTCAGGGTCAGGAGGCGTGGGCTCACATGCTCAAGTGCAAGAACAACATGAGGCCAAACCGCGGCTTCGTGCAGCAGCTCTCTGCCTGGGAGCGCGCGGTGCTGGGGGAGGAGAGGACTGACATCTCAGAGCCCAGCTTCTGAACCGGGACGGGGACTGCCCAGCGGGAATACACTCACAGCTGAAGAGCATTCACACCCTCcactttacacattttttattttattccaataaAATTTTTCCATGAAACTATAACAATTGTCAATGATGGTTTGTTTGAAGAGACCTTGTAAAGAGTCCAGTTTGGTTTAAATTCTTGCTGTGTTCACTGATG

Function

GO: NA

KEGG:

id description
K18047 STYXL1, DUSP24, MKSTYX; serine/threonine/tyrosine-interacting-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005467 True 1521 mRNA 0.58 9 1027198 1030499

Neighbor

gene id symbol gene type direction distance location
AMCG00005463 NA coding upstream 13805 1004963 ~ 1013393 (+)
AMCG00005469 ap2b1,LOC107681897,LOC106603458 coding upstream 28364 988627 ~ 998834 (+)
AMCG00005470 NA coding upstream 39491 987348 ~ 987707 (+)
AMCG00005471 NA coding upstream 40263 986631 ~ 986935 (+)
AMCG00005472 NA coding upstream 42239 984690 ~ 984959 (+)
AMCG00005465 NA coding downstream 380 1030879 ~ 1036031 (+)
AMCG00005466 NA coding downstream 32991 1063490 ~ 1072241 (+)
AMCG00005464 NA coding downstream 42553 1073052 ~ 1081418 (+)
AMCG00005390 NA coding downstream 52659 1083158 ~ 1090681 (+)
AMCG00005410 NA coding downstream 183658 1214157 ~ 1244875 (+)
G152040 NA non-coding upstream 12818 1014078 ~ 1014380 (+)
G151978 NA non-coding upstream 336262 690659 ~ 690936 (+)
G151968 NA non-coding upstream 490506 535895 ~ 536692 (+)
G151964 NA non-coding upstream 666906 360093 ~ 360292 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding upstream 671338 355581 ~ 355860 (+)
G152053 NA non-coding downstream 26686 1057185 ~ 1057395 (+)
G152111 NA non-coding downstream 214532 1245031 ~ 1253959 (+)
G152196 NA non-coding downstream 427655 1458154 ~ 1458747 (+)
G152198 NA non-coding downstream 431225 1461724 ~ 1461939 (+)
G152397 NA non-coding downstream 1224866 2255365 ~ 2323345 (+)
G151969 NA other upstream 489835 536751 ~ 537363 (+)
G151967 NA other upstream 627333 398925 ~ 399865 (+)
G152159 NA other downstream 336515 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 345969 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 479003 1509502 ~ 1517580 (+)
G152267 NA other downstream 715461 1745960 ~ 1748934 (+)
G152337 NA other downstream 769312 1799811 ~ 1803903 (+)

Expression


Co-expression Network