AMCG00005470


Basic Information

Item Value
gene id AMCG00005470
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 987348 ~ 987707 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005470
ATGGAGTCTGTGTCCCGAGGCCACAGATTAATCCCGCTCAGACCCTTTTGTCCTCGGGAGCCGTGTCCCCCAGAGTTTGCCGTTGCTCTTGGGGGACACGAACGCCACTCTATCCGCCTGCACGCGACAGAGCGGTCGGTTGCCGTACACAGAGCAAGACAGTCAGGACGCGAAAGATTGATTTCTGGACCTGCGTGGGGCCTCAAGGTGCAACAATGGCAGCTAAAAATAGCAGCTGAGCTCAGAGTCTCATTCTCCTCGGACACGGTGCCTGCGGCGCGCTATGGCTCTGAGCCAACCGGCACTCCTACCGCCCGTCTCTCCTACAGCCGTCATGCGTCGCACACGGATATGCGTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005470 True 360 mRNA 0.59 1 987348 987707

Neighbor

gene id symbol gene type direction distance location
AMCG00005471 NA coding upstream 413 986631 ~ 986935 (+)
AMCG00005472 NA coding upstream 2389 984690 ~ 984959 (+)
AMCG00005468 ap2b1,LOC103360248 coding upstream 2973 973630 ~ 984375 (+)
AMCG00005450 NA coding upstream 24768 958000 ~ 962580 (+)
AMCG00005453 NA coding upstream 30927 953230 ~ 956421 (+)
AMCG00005469 ap2b1,LOC107681897,LOC106603458 coding downstream 920 988627 ~ 998834 (+)
AMCG00005463 NA coding downstream 17256 1004963 ~ 1013393 (+)
AMCG00005467 NA coding downstream 39491 1027198 ~ 1030499 (+)
AMCG00005465 NA coding downstream 43172 1030879 ~ 1036031 (+)
AMCG00005466 NA coding downstream 75783 1063490 ~ 1072241 (+)
G151978 NA non-coding upstream 296412 690659 ~ 690936 (+)
G151968 NA non-coding upstream 450656 535895 ~ 536692 (+)
G151964 NA non-coding upstream 627056 360093 ~ 360292 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding upstream 631488 355581 ~ 355860 (+)
G151941 NA non-coding upstream 739229 175252 ~ 248119 (+)
G152040 NA non-coding downstream 26371 1014078 ~ 1014380 (+)
G152053 NA non-coding downstream 69478 1057185 ~ 1057395 (+)
G152111 NA non-coding downstream 257324 1245031 ~ 1253959 (+)
G152196 NA non-coding downstream 470447 1458154 ~ 1458747 (+)
G152198 NA non-coding downstream 474017 1461724 ~ 1461939 (+)
G151969 NA other upstream 449985 536751 ~ 537363 (+)
G151967 NA other upstream 587483 398925 ~ 399865 (+)
G152159 NA other downstream 379307 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 388761 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 521795 1509502 ~ 1517580 (+)
G152267 NA other downstream 758253 1745960 ~ 1748934 (+)
G152337 NA other downstream 812104 1799811 ~ 1803903 (+)

Expression


Co-expression Network