AMCG00005472


Basic Information

Item Value
gene id AMCG00005472
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 984690 ~ 984959 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005472
ATGATGGCGGTGCGATCCGGCGTCGGCCCACTTCCTGTGCACGGACCTGGCCCGCGTCGGGTCGAGTTTGACCTTGTGCAAGTTCATCTGTTACCTTGTCCCCCTCAGCTCCCTTGTCTCTGCTTATACGACCAGCACCCCAGACGTAAACCCCTGGCCCGGCCCCCCACAGCGCTGCCCGCCTTAGAGTTCACCCCGAGAGCGTCTGGCTCCGGGGCTCTTGGCTCTGCCTGTGTATCGGGCTCCCCTCAGATATCTGTGTATTGCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005472 True 270 mRNA 0.62 1 984690 984959

Neighbor

gene id symbol gene type direction distance location
AMCG00005468 ap2b1,LOC103360248 coding upstream 315 973630 ~ 984375 (+)
AMCG00005450 NA coding upstream 22110 958000 ~ 962580 (+)
AMCG00005453 NA coding upstream 28269 953230 ~ 956421 (+)
AMCG00005449 LOC107103649 coding upstream 37458 935734 ~ 947232 (+)
AMCG00005452 NA coding upstream 51270 926198 ~ 933420 (+)
AMCG00005471 NA coding downstream 1672 986631 ~ 986935 (+)
AMCG00005470 NA coding downstream 2389 987348 ~ 987707 (+)
AMCG00005469 ap2b1,LOC107681897,LOC106603458 coding downstream 3668 988627 ~ 998834 (+)
AMCG00005463 NA coding downstream 20004 1004963 ~ 1013393 (+)
AMCG00005467 NA coding downstream 42239 1027198 ~ 1030499 (+)
G151978 NA non-coding upstream 293754 690659 ~ 690936 (+)
G151968 NA non-coding upstream 447998 535895 ~ 536692 (+)
G151964 NA non-coding upstream 624398 360093 ~ 360292 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding upstream 628830 355581 ~ 355860 (+)
G151941 NA non-coding upstream 736571 175252 ~ 248119 (+)
G152040 NA non-coding downstream 29119 1014078 ~ 1014380 (+)
G152053 NA non-coding downstream 72226 1057185 ~ 1057395 (+)
G152111 NA non-coding downstream 260072 1245031 ~ 1253959 (+)
G152196 NA non-coding downstream 473195 1458154 ~ 1458747 (+)
G152198 NA non-coding downstream 476765 1461724 ~ 1461939 (+)
G151969 NA other upstream 447327 536751 ~ 537363 (+)
G151967 NA other upstream 584825 398925 ~ 399865 (+)
G152159 NA other downstream 382055 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 391509 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 524543 1509502 ~ 1517580 (+)
G152267 NA other downstream 761001 1745960 ~ 1748934 (+)
G152337 NA other downstream 814852 1799811 ~ 1803903 (+)

Expression


Co-expression Network