AMCG00005489


Basic Information

Item Value
gene id AMCG00005489
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 2070365 ~ 2073296 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005489
ATGCTGTGCCTTGCTGtgctactgtgtgtgtgtgtggccgtGCTGCCCCCGCCAGCTGCCAATCAACCCTTCACCAACAGAGAGTCCTACAGCCAGAGTCTCATTCTCACACGCAAGATCCACCGGGACGTGTGCAGCCTGCTGGCCCGATACaaagAACAACAGATTGGGAGCAAGACCTTTGAAGATTACAGCCTTCTTCTGAGCAGCCTGCCTACAGCCAGCATGAATTACAGCTACTGGTTGAGCATGGAGgATGCAGAACGGCTCCAGGTTAACATCAGGGACCTCCATGTGTTTAGGATGCACATAGAGGCCAAGAAGCTATACGAGCAAGAAAAGGAGCCCCAGTCCTCTTTGATCCAGGCCTTGGACATGATTCTACTGGACATTCGTGACCTGTTCTTCCAGATCACACACCAGCTGGAAGCACTGCAGGCTCCCTCCCCAGTGCTGAGTAGCATAGCCCTGCCCAGCAAACTCCTGAACCCCCAGTTCCCCTGGCTGAGCCGACTGCAGGGCTACATCATTCTGCGAGACCTGCAGAATTACCTGGACAAGATGGTACGGGATTTCACACTGCTCAAGACCAATGAGCAGCAGCACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005489 True 609 mRNA 0.54 4 2070365 2073296

Neighbor

gene id symbol gene type direction distance location
AMCG00005488 NA coding downstream 11112 2057982 ~ 2059253 (-)
AMCG00005431 NA coding downstream 114305 1949221 ~ 1956060 (-)
AMCG00005421 lrrc75a,LOC107585608,LOC107664947,LOC108278186,LOC106935686,LOC107690424,LOC107744770 coding downstream 213160 1839567 ~ 1857205 (-)
AMCG00005420 NA coding downstream 262285 1802917 ~ 1808080 (-)
AMCG00005462 NA coding downstream 295914 1754913 ~ 1774451 (-)
AMCG00005533 NA coding upstream 144413 2217709 ~ 2222776 (-)
AMCG00005521 NA coding upstream 211148 2284444 ~ 2300854 (-)
AMCG00005520 LOC106604060,LOC107718056,LOC102197200,LOC101483717,LOC102785299,LOC106946208 coding upstream 235382 2308678 ~ 2321643 (-)
AMCG00005519 mate4,slc47a2,LOC107599236,LOC107599264,LOC106604060 coding upstream 258559 2331855 ~ 2332896 (-)
AMCG00005485 NA coding upstream 511554 2584850 ~ 2585293 (-)
G152344 ywhae,LOC105005922,LOC106567579 non-coding downstream 123565 1941023 ~ 1946800 (-)
G152335 NA non-coding downstream 317627 1745953 ~ 1752738 (-)
G152320 NA non-coding downstream 376810 1692749 ~ 1693555 (-)
G152197 NA non-coding downstream 611703 1458237 ~ 1458662 (-)
G152178 NA non-coding downstream 671973 1397341 ~ 1398392 (-)
G152424 NA non-coding upstream 94308 2167604 ~ 2175954 (-)
G152452 mate4,LOC107718064,LOC107718062,LOC107699952,LOC106604060 non-coding upstream 221537 2294833 ~ 2318672 (-)
G152473 NA non-coding upstream 341776 2415072 ~ 2445097 (-)
G152652 NA non-coding upstream 1086761 3160057 ~ 3160364 (-)
G152661 NA non-coding upstream 1110525 3183821 ~ 3184685 (-)
AMCG00005461 eif4h other downstream 346865 1708683 ~ 1723500 (-)
G152271 NA other downstream 454868 1521742 ~ 1615497 (-)
G152277 NA other downstream 562737 1505940 ~ 1507628 (-)
AMCG00005419 NA other downstream 693892 1371342 ~ 1376473 (-)
G152133 NA other downstream 734925 1219327 ~ 1335440 (-)
AMCG00005532 NA other upstream 124058 2197354 ~ 2329684 (-)
AMCG00005517 NA other upstream 333229 2406525 ~ 2410247 (-)
AMCG00005491 supt6h,LOC107603297 other upstream 799210 2872506 ~ 2890448 (-)
G152645 NA other upstream 998564 3071860 ~ 3090714 (-)
AMCG00005525 LOC106567758 other upstream 1533665 3606961 ~ 3632712 (-)

Expression


Co-expression Network