Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00005509 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 3151681 ~ 3171935 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00005509 | True | 741 | mRNA | 0.66 | 5 | 3151681 | 3171935 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005490 | sdf2,LOC106602908 | coding | upstream | 255012 | 2893305 ~ 2896669 (+) |
| AMCG00005492 | NA | coding | upstream | 279808 | 2866971 ~ 2871873 (+) |
| AMCG00005494 | rab34,LOC108443499,LOC102306323,LOC102777300,LOC108278203 | coding | upstream | 294569 | 2850092 ~ 2857112 (+) |
| AMCG00005493 | NA | coding | upstream | 306980 | 2834497 ~ 2844701 (+) |
| AMCG00005502 | synrg,LOC107727910 | coding | upstream | 512773 | 2583399 ~ 2638908 (+) |
| AMCG00005506 | NA | coding | downstream | 1644 | 3173579 ~ 3179680 (+) |
| AMCG00005507 | nlk | coding | downstream | 29566 | 3201501 ~ 3202760 (+) |
| AMCG00005508 | nlk,nlk2,LOC107682651,LOC107756449,LOC107666197 | coding | downstream | 57754 | 3229689 ~ 3256106 (+) |
| AMCG00005499 | NA | coding | downstream | 112935 | 3284870 ~ 3295314 (+) |
| AMCG00005500 | NA | coding | downstream | 132954 | 3304889 ~ 3306844 (+) |
| G152644 | NA | non-coding | upstream | 61026 | 3071950 ~ 3090655 (+) |
| G152397 | NA | non-coding | upstream | 828336 | 2255365 ~ 2323345 (+) |
| G152198 | NA | non-coding | upstream | 1689742 | 1461724 ~ 1461939 (+) |
| G152196 | NA | non-coding | upstream | 1692934 | 1458154 ~ 1458747 (+) |
| G152111 | NA | non-coding | upstream | 1897722 | 1245031 ~ 1253959 (+) |
| G152655 | NA | non-coding | downstream | 11886 | 3183821 ~ 3186988 (+) |
| G152656 | NA | non-coding | downstream | 27397 | 3199332 ~ 3200187 (+) |
| G152657 | NA | non-coding | downstream | 88275 | 3260210 ~ 3260429 (+) |
| G152764 | NA | non-coding | downstream | 551978 | 3723913 ~ 3761827 (+) |
| G152866 | NA | non-coding | downstream | 1086931 | 4258866 ~ 4260635 (+) |
| G152588 | rpl23a | other | upstream | 302073 | 2845217 ~ 2849608 (+) |
| AMCG00005481 | dynll2a,LOC107554284,LOC103397138 | other | upstream | 641005 | 2503910 ~ 2510676 (+) |
| AMCG00005429 | ywhae,LOC106567579,LOC105005922 | other | upstream | 1204881 | 1929455 ~ 1946800 (+) |
| G152337 | NA | other | upstream | 1347778 | 1799811 ~ 1803903 (+) |
| G152267 | NA | other | upstream | 1402747 | 1745960 ~ 1748934 (+) |
| AMCG00005498 | lyrm9,LOC102789908 | other | downstream | 94439 | 3266374 ~ 3270844 (+) |
| AMCG00005538 | NA | other | downstream | 1110582 | 4282517 ~ 4305156 (+) |
| AMCG00005546 | acaca,LOC107691719 | other | downstream | 1388278 | 4560213 ~ 4563020 (+) |
| AMCG00005583 | LOC106603777,LOC105895333,LOC108428505 | other | downstream | 2042878 | 5214813 ~ 5241776 (+) |
| AMCG00005647 | NA | other | downstream | 3262586 | 6434521 ~ 6437078 (+) |
