Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00005566 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 4932924 ~ 4935507 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00005566 | True | 288 | mRNA | 0.58 | 2 | 4932924 | 4935507 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005564 | bcas3,LOC107743646,LOC107664928,LOC107757056 | coding | downstream | 11233 | 4878015 ~ 4921691 (-) |
| AMCG00005542 | NA | coding | downstream | 169763 | 4762567 ~ 4763161 (-) |
| AMCG00005543 | NA | coding | downstream | 181954 | 4749079 ~ 4750970 (-) |
| AMCG00005540 | tbx2,tbx2b,LOC107685069 | coding | downstream | 202472 | 4718184 ~ 4730452 (-) |
| AMCG00005541 | NA | coding | downstream | 236809 | 4678650 ~ 4696115 (-) |
| AMCG00005563 | bcas3,LOC107685068,LOC107562951,LOC107743646,LOC107664928 | coding | upstream | 2644 | 4938151 ~ 4943348 (-) |
| AMCG00005565 | NA | coding | upstream | 19539 | 4955046 ~ 4966536 (-) |
| AMCG00005562 | NA | coding | upstream | 32979 | 4968486 ~ 4983410 (-) |
| AMCG00005581 | NA | coding | upstream | 60146 | 4995653 ~ 5001142 (-) |
| AMCG00005582 | ift20 | coding | upstream | 146850 | 5082357 ~ 5085799 (-) |
| G152942 | NA | non-coding | downstream | 401192 | 4531440 ~ 4531732 (-) |
| G152915 | NA | non-coding | downstream | 632526 | 4292030 ~ 4300398 (-) |
| G152894 | NA | non-coding | downstream | 672612 | 4257221 ~ 4260312 (-) |
| G152853 | NA | non-coding | downstream | 939403 | 3989919 ~ 3993521 (-) |
| G152815 | NA | non-coding | downstream | 1140480 | 3788208 ~ 3792444 (-) |
| G153141 | ruvbl2,LOC107664527,LOC107597476,LOC107677411,LOC107587476,LOC107722783 | non-coding | upstream | 415846 | 5351353 ~ 5352345 (-) |
| G153143 | NA | non-coding | upstream | 417846 | 5353353 ~ 5355697 (-) |
| G153178 | NA | non-coding | upstream | 551802 | 5487309 ~ 5489599 (-) |
| G153236 | NA | non-coding | upstream | 712851 | 5648358 ~ 5648709 (-) |
| G153248 | dhx33 | non-coding | upstream | 805985 | 5741492 ~ 5748572 (-) |
| AMCG00005539 | NA | other | downstream | 640053 | 4284717 ~ 4292871 (-) |
| AMCG00005560 | LOC106568075,LOC104946632,LOC106603282 | other | downstream | 1063715 | 3850136 ~ 3869209 (-) |
| AMCG00005525 | LOC106567758 | other | downstream | 1300212 | 3606961 ~ 3632712 (-) |
| G152645 | NA | other | downstream | 1842210 | 3071860 ~ 3090714 (-) |
| AMCG00005491 | supt6h,LOC107603297 | other | downstream | 2042476 | 2872506 ~ 2890448 (-) |
| G153130 | NA | other | upstream | 365262 | 5300769 ~ 5302198 (-) |
| G153342 | NA | other | upstream | 1145728 | 6081235 ~ 6082866 (-) |
| AMCG00005628 | LOC107090330,LOC102220786 | other | upstream | 1296652 | 6232159 ~ 6234028 (-) |
| AMCG00005674 | NA | other | upstream | 1554748 | 6490255 ~ 6496571 (-) |
| AMCG00005685 | NA | other | upstream | 2173711 | 7109218 ~ 7145807 (-) |
