Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00005602 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 5745457 ~ 5747836 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005759 | mitochondrial matrix | cellular_component |
| id | description |
|---|---|
| K15414 | C1QBP; complement component 1 Q subcomponent-binding protein, mitochondrial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00005602 | True | 873 | mRNA | 0.58 | 6 | 5745457 | 5747836 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005603 | dhx33 | coding | upstream | 636 | 5737790 ~ 5744821 (+) |
| AMCG00005589 | NA | coding | upstream | 78589 | 5648461 ~ 5666868 (+) |
| AMCG00005590 | atp2a3,LOC102312511 | coding | upstream | 105521 | 5626706 ~ 5639936 (+) |
| AMCG00005592 | atp2a3,LOC106567410 | coding | upstream | 128348 | 5612644 ~ 5617109 (+) |
| AMCG00005591 | atp2a3 | coding | upstream | 140936 | 5595171 ~ 5604521 (+) |
| AMCG00005604 | NA | coding | downstream | 4701 | 5752537 ~ 5772059 (+) |
| AMCG00005596 | NA | coding | downstream | 28678 | 5776514 ~ 5784334 (+) |
| AMCG00005595 | NA | coding | downstream | 37258 | 5785094 ~ 5802056 (+) |
| AMCG00005594 | NA | coding | downstream | 97759 | 5845595 ~ 5846484 (+) |
| AMCG00005607 | NA | coding | downstream | 120504 | 5868340 ~ 5882291 (+) |
| G153154 | LOC106602867,LOC107597455 | non-coding | upstream | 300200 | 5444379 ~ 5445257 (+) |
| G153118 | LOC106602865,LOC108260233,LOC108429749,LOC105010822,LOC103035912,LOC105896079 | non-coding | upstream | 421534 | 5321060 ~ 5323923 (+) |
| G153113 | NA | non-coding | upstream | 436366 | 5307945 ~ 5309091 (+) |
| G153082 | NA | non-coding | upstream | 543922 | 5195788 ~ 5201535 (+) |
| G153080 | NA | non-coding | upstream | 554661 | 5190527 ~ 5190796 (+) |
| G153271 | NA | non-coding | downstream | 52812 | 5800648 ~ 5800892 (+) |
| G153274 | NA | non-coding | downstream | 168999 | 5916835 ~ 5955451 (+) |
| G153312 | NA | non-coding | downstream | 300294 | 6048130 ~ 6048438 (+) |
| G153348 | LOC107090330,LOC102220786 | non-coding | downstream | 484323 | 6232159 ~ 6234047 (+) |
| G153381 | NA | non-coding | downstream | 535152 | 6282988 ~ 6331371 (+) |
| AMCG00005583 | LOC106603777,LOC105895333,LOC108428505 | other | upstream | 503681 | 5214813 ~ 5241776 (+) |
| AMCG00005546 | acaca,LOC107691719 | other | upstream | 1182437 | 4560213 ~ 4563020 (+) |
| AMCG00005538 | NA | other | upstream | 1440301 | 4282517 ~ 4305156 (+) |
| AMCG00005498 | lyrm9,LOC102789908 | other | upstream | 2474613 | 3266374 ~ 3270844 (+) |
| G152588 | rpl23a | other | upstream | 2895849 | 2845217 ~ 2849608 (+) |
| AMCG00005647 | NA | other | downstream | 686685 | 6434521 ~ 6437078 (+) |
| AMCG00005667 | NA | other | downstream | 739882 | 6487718 ~ 6488782 (+) |
| AMCG00005663 | NA | other | downstream | 860807 | 6608643 ~ 6662480 (+) |
| G153675 | NA | other | downstream | 1512841 | 7260677 ~ 7265971 (+) |
| AMCG00005694 | NA | other | downstream | 1559222 | 7307058 ~ 7334571 (+) |
