AMCG00005604


Basic Information

Item Value
gene id AMCG00005604
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 5752537 ~ 5772059 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005604
ATGGCCAAGTCCGAGGGATCGGCCCCCAGGTTCTCCGGCCGGCCCGACCCCCAAAACCTGCCCGACTCTGAATCGGACTCGGACCCCGAGGAGGAACCAGGGCCAGGCGCCGGGACGGGACAGGCGAGGGGGTCCGTTGCCCAGACTCAGGTGATCCACAGCGGACACTTCATGGTCTCCTCCCCGCACAGCGACTCCACTCCCCGCCGGAGGAAGAGCGGGGCGGCGGCTGGGTACGACTTCGACACGGTCAACCGGACCGGCTGCCAGACGTACAGGTTCGGCCCAAGGAGCGCTGGGAGCCTGAGCATCGACCCGACTCTGACCCGGCTGTTTGAtGGAAAAATTGTCTCGCCAAAGTGGAAGTCTTTCAAAGGTCTTCGGTTGCTTTGGAGGGACAAAATCCGCCTTAACAATGGAATATGGAGAGCATGGTACATTCAATATGTGGAGAAGAGGAAGAACCCAGTGTGCGGTTTTGTGACCCCACTGGAGGGCTCTGAGGCGGATGCCCATCGCAAACCCGAGgctATTGTTTTGGAGGGCAGCTATTGGAAGCGGAGGATAGAAGTTGTGATCAAAGAATATCACAAATGGAGGATTTACCACAAGAAAAGAGGGAATGTTTACCAAGAGGGCGTGAAGAAATGGCCCAATCAGATGTTCCAGGAACCCGTGCCCATGCAGGAGGAAGCCCATATGTTTGACCTAGACTGCTTCCTGTCGGACATCTCGGACACCCTGTTCACTATGACGCAGAAGCCCTGCCACTGGGGCGCGGACTGGCACAACACTTACACCAGCAATGCTGACATGATCCAGCCCGGACTGACTCCACTGCAGCCCAACCTGGATGATTTCATGGACATCCCAGATATCTTCATGAGCTATCGCGGCCAATCTCTGGAGCAGGCTGGCTTTGCAGACTGTGGGTATTTTGGCGGCATGTCGGGCAGCGTGTTTTCCCCAGGACCGGCTTCCATGACGGCAGGCACTCTGATGCCCGGTGAGAGCCAGCTGGCACAGGCGAATGCTGTACTGGGTAATGCCAGTAGACTGTCTGTACCTTCCTCCTCCGATGCGCATTCAGACTCCATTTATCACAGACAGTCTTTGCCCCCTGGGATGGCTTATAATCACAGTGGcatgacctctgaccccaaatacaaaacagaggTAGACTACAGCCATCAATCGGAATACCACCGCTCTGACTTGGTGCCGGTAACGACCCCGTATGGGCATGAACATTATACGAGCAGCACAGCGTTGACACACCCGAACATGTCTGCCCTTGCCCAGGACTCACCTTTCACCCCGTATTCCACACCCGGTCACAAATACGGATACAACTCTTCGGTCACGTCCTCGGTTATCACTCACACGGGTTTGACGTCAACCCTCATTCCTCAGGAGCACACAGGACACGGCTACGCGGCCCCTGAGGTGTACTCGCCGGCCCCCTGTGCGTCTTTAGGGTACCCATCTCCTTTCAACACCCAGTCGGGCCTTCCTCCTGTGACCATGCCCCATAACTTCTCTGTGCCTCAAGGAAGTGGGATGAAATACAAGCAGAAAACAGCCAGTGTCAAGTCCAAGAGGTCTGTGCTCACCTCTTCCTCCCCCATGCAGACCAGCTGCTTGGCAAAACTGCTGTCAACCAGCACACCAGAACGTAAATCCACACTGAGTTTTGACCCTCCTGGGGTAGAGGCCAGGACACATCTTTCCACTTCTCCCACCTCCCCATCCAGTGGTGGTGTGCATTTCTCTTGTGGAACTAGCATGGTGGAGACCACAGCCCAGAAACCGCACAGCCCATCCCAATCTGCAGGAATCCCAATGCTGACACCACTACACTGTCAGACAATGATAATCCCAGATGGGAGTCAGAGCACCAGCTCAACTCATGGCTCGGCTGTGTCCGCTTTACTGACGCAAAATACCATGTCTATGTCCTCACCTCTCCTGGTACCCAAGTCAGAAAAGCTGTCCCCAGTACAGACGTTCAACGAGAAGACGTCTTTAACAGTGAGTTTCCGGAGGAATTCAGACCAGTTATCCCCAACACACCCTTCAGAGAAGAGCCCCAGCCCCCAGTCACCACATTCCAACCCCACCCAAGTCAGGCCGGAGCATACCAAGGTGGAGACAAGAAGAATCACGCACATCTCTGCGGAACAGAAAAGGCGATTCAACATCAAACTGGGCTTTGACACATTGCACGGCCTGGTGACGACACTGAGCTCACAGCCCAGCATCAAAATCAGCAAAGCCACCACCTTGCAGAAGACTGCTGAGTACATCGGCAAGATGCAGCAGGAGAGGGCGCAGCTTCACGACGAGGCCCAGAGACTGCGCGTGGAGATCGTGGCACTCAATTCTGCCATCAATGTGTGCCAGCAACAGCTCCCCGCTACCGGGGTGCCCATCACTCGCCAGCGTTTCGACCACATGAGAGAGATGTTCCGGGACTATGTGAGGGCACAAACGCTGCAGAATTGGAAGTTCTGGATTTTCAGCATTATAATTGAGCCGCTGTTTGAGTCCTACAATGGGATGGTGTCTACTGCCAGTGTGGAAGACTTGTGTCGCACCACTCTCTCCTGGCTGGACCAGCACTGTTCCCTTCCTGCTCTCAGACCCACTGTATTGAGCTCACTCCGCCACCTCAGCACTTCCACCTCCATCTTGACCGATCCCACCCTCGTCCCCGAGCAGGCCACACAGGCTGTGACCCAGAGCAACCCTAGCAACACTTACTCCCCACAACCGCAGGCCTTCTCGTGACAGCGGGCTGTCTGACTGTACAGCTGTGACACGGAACCACTCGCCGATATTGGTGCTGCAGTGTCACTATATGCGGTGTACTCCTCCAATGCCATGTGAGGTCGGATTTCTCAGTTTTGTTGCTGAATTAGCTGAACGTTCAGGGAGTTTGGGGACCTCGACTCATTCATAAAACAGTCTGAAGCCACACCACCACAACCAACTGAAATGGAAGTTGCCATCAGCTCCCAATGCGATTGTAGTCAGATTTGCTGACCAGAGTTCTGAAAGAGATTTAATAACCCCAGCATTGTATTGTTTCATCAAGGCAGGAAATGTATGGATAACAGTGAGTGTGTTACTGTCTGAGCCagtaaaggttttatttttttacaactgtacagtgcatccggaaagtattcacagcgcttcactttttccaccctttgttacagccttattccaaaatggattgaattaattatttcctcaaaattctacaaacaataccccataatgacaacgtgaaaagtttgtttgaaatctttgcaaatttattaaaaacaaaaaagcacatgtacataagtattcacagcctttgccatgaacctcaaaattgagctcaggtgcatcctgtttccactgatcatccttgagatgtttctacaacttgattggagtccacctgtggtaaattcagttgattggacatgatttggaaaggcacacacctgtctatataaggtccc

Function

GO: NA

KEGG:

id description
K09113 MLX; MAX-like protein X

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005604 True 3518 mRNA 0.53 16 5752537 5772059

Neighbor

gene id symbol gene type direction distance location
AMCG00005602 NA coding upstream 4701 5745457 ~ 5747836 (+)
AMCG00005603 dhx33 coding upstream 7716 5737790 ~ 5744821 (+)
AMCG00005589 NA coding upstream 85669 5648461 ~ 5666868 (+)
AMCG00005590 atp2a3,LOC102312511 coding upstream 112601 5626706 ~ 5639936 (+)
AMCG00005592 atp2a3,LOC106567410 coding upstream 135428 5612644 ~ 5617109 (+)
AMCG00005596 NA coding downstream 4455 5776514 ~ 5784334 (+)
AMCG00005595 NA coding downstream 13035 5785094 ~ 5802056 (+)
AMCG00005594 NA coding downstream 73536 5845595 ~ 5846484 (+)
AMCG00005607 NA coding downstream 96281 5868340 ~ 5882291 (+)
AMCG00005609 NA coding downstream 119694 5891753 ~ 5896304 (+)
G153154 LOC106602867,LOC107597455 non-coding upstream 307280 5444379 ~ 5445257 (+)
G153118 LOC106602865,LOC108260233,LOC108429749,LOC105010822,LOC103035912,LOC105896079 non-coding upstream 428614 5321060 ~ 5323923 (+)
G153113 NA non-coding upstream 443446 5307945 ~ 5309091 (+)
G153082 NA non-coding upstream 551002 5195788 ~ 5201535 (+)
G153080 NA non-coding upstream 561741 5190527 ~ 5190796 (+)
G153271 NA non-coding downstream 28589 5800648 ~ 5800892 (+)
G153274 NA non-coding downstream 144776 5916835 ~ 5955451 (+)
G153312 NA non-coding downstream 276071 6048130 ~ 6048438 (+)
G153348 LOC107090330,LOC102220786 non-coding downstream 460100 6232159 ~ 6234047 (+)
G153381 NA non-coding downstream 510929 6282988 ~ 6331371 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 510761 5214813 ~ 5241776 (+)
AMCG00005546 acaca,LOC107691719 other upstream 1189517 4560213 ~ 4563020 (+)
AMCG00005538 NA other upstream 1447381 4282517 ~ 4305156 (+)
AMCG00005498 lyrm9,LOC102789908 other upstream 2481693 3266374 ~ 3270844 (+)
G152588 rpl23a other upstream 2902929 2845217 ~ 2849608 (+)
AMCG00005647 NA other downstream 662462 6434521 ~ 6437078 (+)
AMCG00005667 NA other downstream 715659 6487718 ~ 6488782 (+)
AMCG00005663 NA other downstream 836584 6608643 ~ 6662480 (+)
G153675 NA other downstream 1488618 7260677 ~ 7265971 (+)
AMCG00005694 NA other downstream 1534999 7307058 ~ 7334571 (+)

Expression


Co-expression Network