AMCG00005605


Basic Information

Item Value
gene id AMCG00005605
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 5748776 ~ 5751438 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005605
aaacaaaaaaaaacaacaacaaatgattaaaactaaaactatagGATGTGTTGTTGTACATATACCATTACAGTCTGGGGTGCACCAAAaatatgttcattattattCGACTGGAAGATTACAAATATTATCATGAAATTGTATAATGTACACGTTTAAATACAATCGTGAGACTTTTAGTACCAGTGTCACTGTTGTAGGTCCAGGCAGATCAGAACAGAAACCAACACACTACAGAGTTGCCGGGTATAAACTACAAATCCCATGACGCACCGCGGCGCACGTCTGTTACGTTGATGGGCGGGGCAAAGGTTAAAAGTCGTAGACGAAGGAAGAACCGGGAACGCGGGGGAAGAGTGTGTTGCTCTCCGAAGAGGGAAACTGTACGGATCGTGGATTTTCCCTTCGTCTCGTTTGATTCCTCCATGGACGCCCTGCACAGACACCGCTCTCTGTATAAAGGCACGACGCCGCCGTGGAAGGAGACCTACAGGAAGCGCTGCGTGGAGAGGCTGAAGAACAGCCGGTCCCAGCTGCTGGAGCGGTACCGCCAGGTGGGGGAGAGCATGCACTGCGGTCTGAAAGGCTCCTTCCTGGTCCAGGAGGTGATGGAAGAGGAGTGGAGCGCCTTGCAGTGCATGGACCAGAGACTGCCCTCCCTGTGGACCAAGGATGGCTTGGGAGAAATGTACAAGATGATGCAGGACAATGACGAGCTGGCCGTCCTGGAAGAGATCCAGCAGGAGCTCCTGTCACAAGAACGGTCCATCATTGACGAGTACGAGCAGAACCTGCTGTACGAGGAACAGTATCTAGACGCCTTGGTGGAAGGAATGGAAGCAGAAGGGCAGATTATCTGTCCGGTTTGTCGCGTGAATAACCTGACCGTGAACAGCCTCTTCGTCTCGTGTAAATGTGGGATGTACATCAATACCAGGCAAAGAAACCTCACCATGGAGAGCCTGCACTTGCTGCTGGAGAAAAGTGTGATGGAGCACCTGGACCAGTGCTCCCACAATCCTGTGTTCTCTGTGGCCAACAGCACAGATGGAGTCAATCTGCTGATCAGCTGCACGGCCTGTGATCATCTGTCAGTTGTCTTGTGAAGGAAGACActagtaattcattttaaaagcagccaAAGATATTTACACTTCCGAATCGGAAAGCATAGATCTTGTTTGTCGCTTGTATAgtcttatttaatttctgtgaaataaagttattcatgttttgccTTGGTACTTCATTTGTAAAgttgtttttccttcattatTTGCAAATTTTGCAATTTCTCCCAGTGGTTGTAAGCTCAGTACATAAGCGTGGGGAAGTGGAACGACTGAGTCGTATCTTCTGTATTGGAATGAATAAATCTGCACTGAAATATTGATCTTGCTc

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005605 True 1401 mRNA 0.47 7 5748776 5751438

Neighbor

gene id symbol gene type direction distance location
AMCG00005606 NA coding downstream 39321 5666860 ~ 5709455 (-)
AMCG00005625 NA coding downstream 235382 5508252 ~ 5513394 (-)
AMCG00005575 NA coding downstream 280940 5460919 ~ 5467836 (-)
AMCG00005576 LOC106602867,LOC107597455 coding downstream 304166 5444161 ~ 5444610 (-)
AMCG00005574 LOC106602867 coding downstream 342877 5372461 ~ 5405899 (-)
AMCG00005610 LOC101160255,LOC103021402,LOC100700540,LOC105025792 coding upstream 168762 5920200 ~ 5931156 (-)
AMCG00005611 NA coding upstream 185377 5936815 ~ 5947317 (-)
AMCG00005601 supt4h1 coding upstream 318754 6070192 ~ 6072666 (-)
AMCG00005598 hpda,LOC108413266,LOC108260398 coding upstream 407287 6158725 ~ 6170298 (-)
AMCG00005629 NA coding upstream 495712 6247150 ~ 6255757 (-)
G153248 dhx33 non-coding downstream 204 5741492 ~ 5748572 (-)
G153236 NA non-coding downstream 100067 5648358 ~ 5648709 (-)
G153178 NA non-coding downstream 259177 5487309 ~ 5489599 (-)
G153143 NA non-coding downstream 393079 5353353 ~ 5355697 (-)
G153141 ruvbl2,LOC107664527,LOC107597476,LOC107677411,LOC107587476,LOC107722783 non-coding downstream 396431 5351353 ~ 5352345 (-)
G153272 NA non-coding upstream 49210 5800648 ~ 5800906 (-)
G153313 NA non-coding upstream 296692 6048130 ~ 6048470 (-)
G153324 NA non-coding upstream 317349 6068787 ~ 6069014 (-)
G153373 NA non-coding upstream 482690 6234128 ~ 6234359 (-)
G153374 NA non-coding upstream 483110 6234548 ~ 6234858 (-)
G153130 NA other downstream 446578 5300769 ~ 5302198 (-)
AMCG00005539 NA other downstream 1455905 4284717 ~ 4292871 (-)
AMCG00005560 LOC106568075,LOC104946632,LOC106603282 other downstream 1879567 3850136 ~ 3869209 (-)
AMCG00005525 LOC106567758 other downstream 2116064 3606961 ~ 3632712 (-)
G152645 NA other downstream 2658062 3071860 ~ 3090714 (-)
G153342 NA other upstream 329797 6081235 ~ 6082866 (-)
AMCG00005628 LOC107090330,LOC102220786 other upstream 480721 6232159 ~ 6234028 (-)
AMCG00005674 NA other upstream 738817 6490255 ~ 6496571 (-)
AMCG00005685 NA other upstream 1357780 7109218 ~ 7145807 (-)
G153733 auts2 other upstream 2034116 7785554 ~ 7788321 (-)

Expression


Co-expression Network