AMCG00005607


Basic Information

Item Value
gene id AMCG00005607
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 5868340 ~ 5882291 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005607
TACTCTGAGGAAGAGATCAGACAGAAAGTGGGCACCTTTCGGCAAATGCTGATGGAGAAGGAGGGAGTGATCACCCGGGAGGACCAGCATGGACACCCAATGATTAATCACGGGGGTGAGGAGCACAGAGAGGACCTGAGACTGGCAGAGGGATATGTGGAGCAATGCGATTGTCATGGCGACTGCTATGCGAGGGAATCTGTCAGTCGCGCTGATTACAGAATGAAGAGGAAATCAAGCAGCTCTGCCTCACCCCCTCCCAAGAAACGAAAGAAAAAGAAGTCCGGACGCAGGAGAAGTCGTTTTGACAGCTCCTCTCCTCccaggaaagaaaagaagaaaaaaagtgggaagaaacacaaaagagaCAGGTCGGCGTCCGGTTCAAGAAAAAAGCGGAGGTACAGATCCGGCAGCccgaaaaacaaacataaagacaagaacaaacaaaggAAGAGGCCAAACTCTAAGCACAGAGTCGATAGGCACAAGTCCAACTGCACCCCCTCTAGTCGGAGCGGCTCTGCATCGCCCGGTCATGTCCCCAACCCTCCAGCCCTCTGGCAGAATGGCCACCGAGATGGCAGCAAGAACGGCAGGGAAAGCGGGACACACAGCCTCCCAGGGGAGAAATCACAGGATGTATGTATTCTCTtctattcctctctctctcttccctttctGTGCACTCTCTCTTCTTACGTCTTCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005607 True 711 mRNA 0.52 7 5868340 5882291

Neighbor

gene id symbol gene type direction distance location
AMCG00005594 NA coding upstream 21856 5845595 ~ 5846484 (+)
AMCG00005595 NA coding upstream 66284 5785094 ~ 5802056 (+)
AMCG00005596 NA coding upstream 84006 5776514 ~ 5784334 (+)
AMCG00005604 NA coding upstream 96281 5752537 ~ 5772059 (+)
AMCG00005602 NA coding upstream 120504 5745457 ~ 5747836 (+)
AMCG00005609 NA coding downstream 9462 5891753 ~ 5896304 (+)
AMCG00005608 NA coding downstream 19200 5901491 ~ 5904639 (+)
AMCG00005600 LOC106603951 coding downstream 122101 6004392 ~ 6045735 (+)
AMCG00005599 NA coding downstream 190935 6073226 ~ 6077726 (+)
AMCG00005597 NA coding downstream 269008 6151299 ~ 6155374 (+)
G153271 NA non-coding upstream 67448 5800648 ~ 5800892 (+)
G153154 LOC106602867,LOC107597455 non-coding upstream 423083 5444379 ~ 5445257 (+)
G153118 LOC106602865,LOC108260233,LOC108429749,LOC105010822,LOC103035912,LOC105896079 non-coding upstream 544417 5321060 ~ 5323923 (+)
G153113 NA non-coding upstream 559249 5307945 ~ 5309091 (+)
G153082 NA non-coding upstream 666805 5195788 ~ 5201535 (+)
G153274 NA non-coding downstream 34544 5916835 ~ 5955451 (+)
G153312 NA non-coding downstream 165839 6048130 ~ 6048438 (+)
G153348 LOC107090330,LOC102220786 non-coding downstream 349868 6232159 ~ 6234047 (+)
G153381 NA non-coding downstream 400697 6282988 ~ 6331371 (+)
G153390 NA non-coding downstream 450961 6333252 ~ 6393728 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 626564 5214813 ~ 5241776 (+)
AMCG00005546 acaca,LOC107691719 other upstream 1305320 4560213 ~ 4563020 (+)
AMCG00005538 NA other upstream 1563184 4282517 ~ 4305156 (+)
AMCG00005498 lyrm9,LOC102789908 other upstream 2597496 3266374 ~ 3270844 (+)
G152588 rpl23a other upstream 3018732 2845217 ~ 2849608 (+)
AMCG00005647 NA other downstream 552230 6434521 ~ 6437078 (+)
AMCG00005667 NA other downstream 605427 6487718 ~ 6488782 (+)
AMCG00005663 NA other downstream 726352 6608643 ~ 6662480 (+)
G153675 NA other downstream 1378386 7260677 ~ 7265971 (+)
AMCG00005694 NA other downstream 1424767 7307058 ~ 7334571 (+)

Expression


Co-expression Network