Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00005642 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 6305833 ~ 6309531 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00005642 | True | 549 | mRNA | 0.53 | 5 | 6305833 | 6309531 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005638 | NA | coding | downstream | 8886 | 6288469 ~ 6296947 (-) |
| AMCG00005629 | NA | coding | downstream | 50076 | 6247150 ~ 6255757 (-) |
| AMCG00005598 | hpda,LOC108413266,LOC108260398 | coding | downstream | 135535 | 6158725 ~ 6170298 (-) |
| AMCG00005601 | supt4h1 | coding | downstream | 233167 | 6070192 ~ 6072666 (-) |
| AMCG00005611 | NA | coding | downstream | 358516 | 5936815 ~ 5947317 (-) |
| AMCG00005640 | NA | coding | upstream | 25 | 6309556 ~ 6317063 (-) |
| AMCG00005639 | NA | coding | upstream | 16665 | 6326196 ~ 6328995 (-) |
| AMCG00005641 | myo19 | coding | upstream | 24756 | 6334287 ~ 6339833 (-) |
| AMCG00005653 | LOC107387056,LOC104963922,LOC107090352,LOC103133851,LOC106956654 | coding | upstream | 80765 | 6390296 ~ 6398509 (-) |
| AMCG00005652 | NA | coding | upstream | 116072 | 6425603 ~ 6432297 (-) |
| G153379 | NA | non-coding | downstream | 48661 | 6240402 ~ 6257172 (-) |
| G153375 | NA | non-coding | downstream | 70424 | 6235183 ~ 6235409 (-) |
| G153374 | NA | non-coding | downstream | 70975 | 6234548 ~ 6234858 (-) |
| G153373 | NA | non-coding | downstream | 71474 | 6234128 ~ 6234359 (-) |
| G153324 | NA | non-coding | downstream | 236819 | 6068787 ~ 6069014 (-) |
| G153487 | NA | non-coding | upstream | 251408 | 6560939 ~ 6563570 (-) |
| G153514 | NA | non-coding | upstream | 337785 | 6647316 ~ 6662496 (-) |
| G153586 | NA | non-coding | upstream | 625899 | 6935430 ~ 6935676 (-) |
| G153638 | NA | non-coding | upstream | 743274 | 7052805 ~ 7053559 (-) |
| G153678 | vmp1,LOC105021956,LOC107728773 | non-coding | upstream | 870097 | 7179628 ~ 7202286 (-) |
| AMCG00005628 | LOC107090330,LOC102220786 | other | downstream | 71805 | 6232159 ~ 6234028 (-) |
| G153342 | NA | other | downstream | 222967 | 6081235 ~ 6082866 (-) |
| G153130 | NA | other | downstream | 1003635 | 5300769 ~ 5302198 (-) |
| AMCG00005539 | NA | other | downstream | 2012962 | 4284717 ~ 4292871 (-) |
| AMCG00005560 | LOC106568075,LOC104946632,LOC106603282 | other | downstream | 2436624 | 3850136 ~ 3869209 (-) |
| AMCG00005674 | NA | other | upstream | 180724 | 6490255 ~ 6496571 (-) |
| AMCG00005685 | NA | other | upstream | 799687 | 7109218 ~ 7145807 (-) |
| G153733 | auts2 | other | upstream | 1476023 | 7785554 ~ 7788321 (-) |
| AMCG00005704 | NA | other | upstream | 1689805 | 7999336 ~ 8001405 (-) |
| G153806 | NA | other | upstream | 1782217 | 8091748 ~ 8124685 (-) |
