AMCG00005650 (dhrs11,LOC107562199)


Basic Information

Item Value
gene id AMCG00005650
gene name dhrs11,LOC107562199
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 6376102 ~ 6388493 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005650
ATGCTTGTCCAGTGTCGGGGGTTATTTCCTGTGGTTGGCGCTGTGGCTGCTGTAGAGTCGTGGGCCGCAGCTGACAGTCTGTGTTCTCTGTCTTTGCAGAAGCTTGCCGCCGAGTGCCAGAGCGCCGGCTACAGCGGGACCCTGGTGCCCTACAAATGCGACCTGTCCAACGAGGAGGAGATCCTGTCCATGTTCTCGGCCATCAAAACCCTGCACCAGGGCGTGGACGTGTGCATCAACAACGCGGGCCTGGCGCACCCCGAGCCCCTGCTGAGCGGCAGGACCGAGGGCTGGAGGAACATGATCGACGTCAATGTCCTTGCCTTGTCAATCTGCACCCGCGAGGCCTACCAGTCCATGAAGGAGCGGAGCGTGGATGACGGGCACATTATCAACATCAATAGCATGAGCGGGCACAGGGTGGTGCCCAGCGCCGCCGTGCATTTCTACGCCGCCACGAAGTACGCAGTCACGGCACTGACCGAGGGGCTTCGGCAGGAACTGCGGGAAGCCAAGACGCATATAAGAGCCACGTGTATATCCCCCGGGCTGGTGGAAACTGAATTCGCTTTCCGGCTCCACAACAGCGACCCAGAGAAAGCTGCAGCAACATACGAAAGCATAAAGTGTTTAAAAGCCGAAGATATAGCCAGTGCCATCACTTACGTCCTTAGCGCCCCTCCCCACGTACAGATTGGAGACATTCAGCTGAAGCCCGTAGAGCAGGTGTCATAGCAACCAGAGAGGAGGCAGCTGGCACGGCAGGACGGCACGGCAGTCTAGGTCACTCCCCAGGGACCCCTGCTGGACACAACTCGTTTGAACGCGATTGGAAGGATCGAACCGGGAGACGCCAGTCCTCGTGGGGCTGTGTTCGCCTGGTGGGAAACGGGCCCTCTGTGATTTGGAAAGGATGTAACACTACCGTATAATTGAGAAAGCTGCAGGAATAGAATATGTCAGATTTGGTGTATTTTTCAGCCTTTgtacaaaaaaatcataataatggtGTTGCTCTTCGAGTAAGTGGTCATGCACGGTCATTATTACAGTGAAAGCTGATGCTGTCGATGCACAtgagttgtttattttgttgctgttgttgctgttgttattttttcatttttaggttAAATTGCATATCTTTTGAATAGACACAAGAATAAAACCTGATTacctgattatttttttttatttttttttttgataagtGCTAGATCTTCAGTTGTAGTGagatttaatatgaaattaatattagGGGTTTAATCCGCACCCAGTTCTTTGAaaaatttagtttgtttgttggtttgttttattttgaataacgCTTAGTCACTAAattatgccccccccccccgctgcaGTGGCAACAATTCGATTGCTTGCAGAATCACTCGTATCCCTCTGGCAATCaagcaattatatattttgactgTCAGTGAAAGACTTgagttttaattgattaaacCCCTACTCTGTAGCAGACCCCTTGCCCCCCATAAGATCATCCATGTAATTGAGATCAGTTTGCACATTGGATCCATTTGGAGAACACTAATGTGTTGTTTGGACACAGTTTTTAACCCAGATGTGGGCACATGTGTGATTAAAAGTACTGCTCTTGTTTAAGTGTGGATTGTAATGCTAGTTATtctcaataaaaaatacatttttattgctgCTTCATTCCCTGTGTCTTTTATTGTTGTGCTCGTCTTAGCGCTGCTTTCCTCGAGATCTTCGAACATCGGCACGTTTTAGAAGTAGATCCTGTGTGGCTAATTTTCCCGCCACAAAATGCCCGTCTGGATTAACTAAGAGCAATCGCAAGCAGCTGGGAGCTCGGATGGAGCAGAACAACCAGATAACCAAACTATAACAACCGGTTTCGTGTAATAACACGGCCCTTGATTTTCTGTAGGGAAAATTACCCCGTTCCTCTGCGGCCGGGCATTATACCTGGAGAGAGTTTTAAAGCCGAGAAAAAAAAACGCTAAAATTGTCGCTCTGTAGTTTTGAGGGCAACCTCGATGTGTATGCGTGCCTGTGGgtgttctgtgttgtgtgtgtgtacgctTATTATTAGTAGCAGTCGTGAAACGTCTGGGGAACAAATGTGTGTGAATTTTCCACTGGGAATTCCAGGGTTTCCCAGTCAATCTGTGCAGTCTTTCATCCTTTGGCTAAACCTACCTTGGTGTAGTGTTTCATTTACTGAGAAGAAAGTCAGATATTTGCACTGGGGTTTTTGCTGTAGTTCTCTGCAGGAAGGTGAATGTCTTTCTTTGTgtcgtttgttttgtttttagttttgtttgtattattattaataaagaaaaagctGATCATGGGATGTGAAACTCTTGGGCTGGCATTAAAGAGGTGCACACCAAAGACAAACATTTAAGCTATTGTGTTCCCAGGGCCCAATCGTATAATCCAAGCAAATAATTGCCCTTTTCTCTGTCTGACTACAAGAAGTAAAGATGGCACAGTCTGCGTTTAGTGGAACTGGGAGCGGAGAAGATGTTGTTGAGCCGCTTCGAAATAAATTAATCGTGGTGTACAAACGCCTCGGGGAAATGGCATTCCTCGCTTCTGCCGACTGACAGTCCTCATATTAGGAACGATTTCTTCTGCAGACGAAGCACgtcttttgtgttttggtgAAAATGGCTTTCTTTACCCCTAATGAGGAAGAGAAAGTGTTATGTTTTCCTGCGAGGCAATCTGGTTCACATTATGAGATTCTTAAAATAGCATTGTAAAAGCTCTTGGTAACTGTGGAAACGGGGGGAGAGACATTGAGTCCTGTGCGTTTTTATTGTAGCCGCCAGCGAACACCGCTCAAAAGTCAGTCAGGATCAGTAACTTGCAGTTTGTACGTTTGTCATGAGATGTCTGGTTTGTATTCAACCTCCTTTATGTGGGGAATCAGCAACTCTTGGAGGTGGTAAAGCTTCAGCCCACAATGAACTTTTCTGCCGTTTTTACTTcagttcaaatatataaaaacatgcgACTTCATTGCCCGTTATGCTGCGCTTCTTTCCTAATTCACGCCTTTCTGCCTGTCTTCGCTTGGGGTACCTTGCTTTCCTGCTGCTCTTGCTGTGTCTCTGCTTCAGAGGTAGGTGCCTCACGTTTGTAGTGTCACCCCCCATAATGTTAATTGTTTGGTACACAGTTCTGTCAGCTGTCTGGCTGTTGAAAAAAGctgatttattaattgattgacatgaaaataaaactcgAAACCTTGATTTCACTTGATTTAGTCTGGGAAACCGACATCTGAATCTGTGCCGAATATGATGTGGAAGATAAAcatatttctgtgtttcttgCCCCTCCAGTGTCCTGGGACATGTACCCCACCCTGAAGGTGGGGCCCATTTCTATGGGGCTACAAAATACGCAGTGACGGCCCTGACTGAGGGGACCAGACTGGAACTGCTGCAGGAGAAAACCCATATCAGAGTGACGGTGAGACGGCAAATCGCTGCTACTGATATTGCcagcaaacacacattttctggcGAGCGCTGGGGGATGGCCAAGGGAGAGAGtgcttgtgttttgtgtgtgccgGCACTTTTACATgatgctgtctcctttacagAGCATCTCCCCCGGCCTGGTGAGGACAGAGTTTGCCTACAGCACCTTCAAGAACAACAAGGAGGCAGCTGACAAAATGTACTCCCAAATCAAGGTAAATCAGAGAGTTTGCACTTGTTGGCCAAGGTGTCTGTTAGTTTTAGACGCAGGGTGATGGATAACACTAAATGTTTGGGGGAAAACAAGCCGCCAACTCAAAAGTACAAGGTGTTCGCAGATGCGTCTTCTGCAGTTCTGTCTTCTGACCTGGGGACGACTCTTTCACAGGTGCTGGAGGTTGAGGACATCACAAGAGCCGTAGTGTTCGCCCTCACCGCGCCTCCACACGCGCAGGTAGGGCTGCTATGTACCagtgatttgtgtttgtgtttatatttcacCCTGACATCAAAACGCTGTAAAATGCACCATGCAGAATACGCGACAAGAGAGGCAGGGGTACCCAAACAACATTTTTTGGAATAAATGAAAAGTTACTGCCTCgagtttaatctttttttttttttt

Function

symbol description
dhrs11 Enables 17-beta-hydroxysteroid dehydrogenase (NADP+) activity; 17-beta-ketosteroid reductase activity; and 3-keto sterol reductase activity. Involved in steroid biosynthetic process. Predicted to be located in extracellular region.

NR:

description
dehydrogenase/reductase SDR family member 11

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K22970 DHRS11; 17beta-estradiol 17-dehydrogenase / 3beta-hydroxysteroid 3-dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005650 True 4128 mRNA 0.46 6 6376102 6388493

Neighbor

gene id symbol gene type direction distance location
AMCG00005637 NA coding upstream 18454 6355933 ~ 6357648 (+)
AMCG00005635 ggnbp2 coding upstream 21788 6344912 ~ 6354314 (+)
AMCG00005636 NA coding upstream 32680 6340924 ~ 6343422 (+)
AMCG00005634 NA coding upstream 73898 6300937 ~ 6302204 (+)
AMCG00005627 vkorc1l1 coding upstream 135490 6235634 ~ 6240612 (+)
AMCG00005649 flot2,LOC103133852 coding downstream 12125 6400618 ~ 6424353 (+)
AMCG00005648 fam222b coding downstream 79117 6467610 ~ 6476823 (+)
AMCG00005666 emc6,LOC107553592,LOC107552561 coding downstream 119792 6508285 ~ 6508617 (+)
AMCG00005670 NA coding downstream 132359 6520852 ~ 6527544 (+)
AMCG00005668 NA coding downstream 163211 6551704 ~ 6560667 (+)
G153381 NA non-coding upstream 44731 6282988 ~ 6331371 (+)
G153348 LOC107090330,LOC102220786 non-coding upstream 142055 6232159 ~ 6234047 (+)
G153312 NA non-coding upstream 327664 6048130 ~ 6048438 (+)
G153274 NA non-coding upstream 420651 5916835 ~ 5955451 (+)
G153271 NA non-coding upstream 575210 5800648 ~ 5800892 (+)
G153485 NA non-coding downstream 172406 6560899 ~ 6563478 (+)
G153626 NA non-coding downstream 713712 7102205 ~ 7157875 (+)
G153687 NA non-coding downstream 908641 7297134 ~ 7297381 (+)
G153689 NA non-coding downstream 909661 7298154 ~ 7298512 (+)
G153702 NA non-coding downstream 971891 7360384 ~ 7361317 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 1134326 5214813 ~ 5241776 (+)
AMCG00005546 acaca,LOC107691719 other upstream 1813082 4560213 ~ 4563020 (+)
AMCG00005538 NA other upstream 2070946 4282517 ~ 4305156 (+)
AMCG00005498 lyrm9,LOC102789908 other upstream 3105258 3266374 ~ 3270844 (+)
G152588 rpl23a other upstream 3526494 2845217 ~ 2849608 (+)
AMCG00005647 NA other downstream 46028 6434521 ~ 6437078 (+)
AMCG00005667 NA other downstream 99225 6487718 ~ 6488782 (+)
AMCG00005663 NA other downstream 220150 6608643 ~ 6662480 (+)
G153675 NA other downstream 872184 7260677 ~ 7265971 (+)
AMCG00005694 NA other downstream 918565 7307058 ~ 7334571 (+)

Expression


Co-expression Network