AMCG00005658


Basic Information

Item Value
gene id AMCG00005658
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 7601285 ~ 7607914 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005658
ATGCCCTGCCTGTCGTTCATATTTAATAAGCCCCAGCCTCAGAGTGCAGAAGAAGGTCAGTCTCGGGCCGCAGCCCCCGTGTGGGTCGGCCACGGCTTCAAGAGAACGCAGACGGGGGGACCAAACGACGATGTCATCTCTCCTCAGGGGCCCGAGACCTTTCTGCTCCCGTGCGCGCCTTTGAAGTATTCAGCGGAGAATctaaAACCTGGACAAAACAACTGCAAGGACAGCGACAGCGAGAGTGTCAGCGGCGAATCGAAGCACTCCATCCGCAGCAGCTCCCGAGAACGGCTCAGTGATAGCCGCCCCGGCCTGACTTACATCACGACCCGTCCCTGCCGCATTCACACCCGTGTGTCTGAGAGTCCGAATGCCAGCCACTCTGGTTGTGGACTCAGCGAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005658 True 408 mRNA 0.59 5 7601285 7607914

Neighbor

gene id symbol gene type direction distance location
AMCG00005657 NA coding upstream 50031 7549718 ~ 7551254 (+)
AMCG00005656 auts2 coding upstream 101597 7494110 ~ 7499688 (+)
AMCG00005699 NA coding upstream 189699 7400104 ~ 7411586 (+)
AMCG00005695 NA coding upstream 245501 7351194 ~ 7355784 (+)
AMCG00005697 NA coding upstream 254306 7343988 ~ 7346979 (+)
AMCG00005690 wbscr17,LOC106581212,LOC106612816 coding downstream 191914 7799828 ~ 7810698 (+)
AMCG00005710 sbds,LOC106581067 coding downstream 342592 7950506 ~ 7953214 (+)
AMCG00005714 NA coding downstream 357145 7965059 ~ 7966067 (+)
AMCG00005713 nips2,LOC106602830,LOC106581053,LOC105028784 coding downstream 359537 7967451 ~ 7975239 (+)
AMCG00005711 cct6a coding downstream 372185 7980099 ~ 7984901 (+)
G153702 NA non-coding upstream 239968 7360384 ~ 7361317 (+)
G153689 NA non-coding upstream 302773 7298154 ~ 7298512 (+)
G153687 NA non-coding upstream 303904 7297134 ~ 7297381 (+)
G153626 NA non-coding upstream 443410 7102205 ~ 7157875 (+)
G153485 NA non-coding upstream 1037807 6560899 ~ 6563478 (+)
G153747 NA non-coding downstream 279652 7887566 ~ 7887780 (+)
G153816 NA non-coding downstream 643387 8251301 ~ 8278074 (+)
G153859 NA non-coding downstream 737764 8345678 ~ 8351749 (+)
G153955 NA non-coding downstream 1121889 8729803 ~ 8730155 (+)
G154025 NA non-coding downstream 1174075 8781989 ~ 8805304 (+)
AMCG00005694 NA other upstream 266714 7307058 ~ 7334571 (+)
G153675 NA other upstream 335314 7260677 ~ 7265971 (+)
AMCG00005663 NA other upstream 938805 6608643 ~ 6662480 (+)
AMCG00005667 NA other upstream 1112503 6487718 ~ 6488782 (+)
AMCG00005647 NA other upstream 1164207 6434521 ~ 6437078 (+)
AMCG00005660 LOC106603524 other downstream 141269 7749183 ~ 7787871 (+)
G153815 NA other downstream 605990 8213904 ~ 8230590 (+)
AMCG00005720 NA other downstream 890588 8498502 ~ 8507097 (+)
AMCG00005787 NA other downstream 1220664 8828578 ~ 8854100 (+)
G154251 NA other downstream 1827986 9435900 ~ 9438269 (+)

Expression


Co-expression Network