AMCG00005664


Basic Information

Item Value
gene id AMCG00005664
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 6582699 ~ 6594894 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005664
GTTTTTTGTTACGGCCAGCGAAGCATGTTGTCATTTGCGCTGGCTGTAATTTTGTACTGCGTCTGGATTAAAGTACTATATAACCAGCAGCGACTGCTCACGACGAGGACTGGAAAGGCGCGTTTATTGGCACTGATCGGGCGAGGCTGCGCTTCTCGGAGCAAAAGCACGCATGGTCCGCATCCGTGTCCGTCCGACGAGCAGCCCGCTGCGGACGGCATCCGGGCCCTGCTGGTCACCGCGCACCCCGACGACGAGTGCATGTTCTTCGCACCCACCGTCCTACAGCTGCTGGAGATCAACGCTGCCGTGCATCTGTTATGCTTGTCGTCAGgaaATTACTATGGCCAAGGGGAACTGCGAAAGAAGGAACTCCTTCAGAGCTGTGAGGTCCTGGGAATCCCAGCCGTTCACGTCACTGTCGTTGACCACAGGTGAGGGAGTCACTGGCCCACGTAGCAGggctattattttaaaagtatatatttttaaatggagcTAAATTTTGTAATCAGCAAATACTGGCCAACTCAACTTACCGTTTAAACCTCATACCATGACAGGGGTGAAGACAACATACATATATCCTACAACGCAAGTACAGTCAGGCCACTGGCAAGTAAACAGCAGAGCTAAAGACATCACTGAGCTAGCTATACACAGCTGGACTCTGCAAACTGAGTGGGAAAGACTGGGAATCACTCAGGATATGCTGGCTCAGTTTTGTGTCATTCTCTGGGGAATCGTCTAAAAAGTCAACTACTAATAGGCCAAGTTTAATAAAACCAGGGAAATCTGGAACAGATATGGCACAACCTGTACTCTTAGTGGAGGCCTTTGTTGGTGGGACCTCAATTGGTATTTCCCAGTGTGGGAAACTATTCCAACAATGCTAAGATGAAAGACAGTCTATTGTGGATGACGGTAGAGATATAACATCAAAGTGGACTTTGCGTTGTGTCATGCCTGAGGAGGTGGTTTGTTCAGAGGAATTTattactgtatatgtaaataaaatcacaggtCTGCACAAGCATCTTTCAGGCAGTCGAGCTGCCAAGGTCTATACGGATCATTACTAAGCCAACCTGGCATGAAAGATGCATAGGGGTAAACACTTCTATTACTCACTAGTGAGGTGTAGGACTGAGGCTGTGACAGAGCGTGCATGTTACAGCAGGATCCCCTTTTCTCGACATGAAAGATCTGCCCCCTGAATATACAACACAGAGACACGGCTCACCGAAGTGATGCCTATTAATTTGGGCTGTGTGTCTTTATTAAAGGTGAGCCAGATTTAGGTAGGCAATATTCAGACGTGTATGTTTAATCCAGAAGGGATTAAAGATCCGTCAGTTGTAATTCTGCGTGGCTGTCTGATTCGCCGAAGAGCTGAGATTGTTGTGAAACAAAACCCATGAACTGAAATGATCTTTCCTAGCAGGAAAGTGCAGCCCGTTCTTCCCAGAATGACCCGGTGATGCAAGTGTTTCCCAAGTTCACCGAGTTTGTAAGAAAGCTAAAGGCtacaataaaatgcttttacGGCATCATTACTAGTTTTCCTAAGAAGTGCAATGACCGTCAGCTGTTTTTCTCAGTAAACACTTTGCGGCATTTTGGCAGGAATCTGCACGGCCCCACCATATTAGAATGAGCAGTCGGGTAGTTACATCTATGTTGGTAACCATTTTtgtgttgtgattttttttactgaaaccCGTACCAAAATGTGCTGCTACTTTTATCACTTTATGTTCAAGCAAAATTGACTAAATTACTCTTAAAAATGCTCTACACACAACCTGGATGTCACTGTAAGACCATTTCTAACTTCATCCGTTTGCCTAATTGAACTTACCGCTGccacatatttaaacattgtttaaacatcCAAATGATACAGTACAGATTTCAAACAGGGGTACCAATTAATCATCCTAACACCGGCATCATATTCAGACTCTTTGTTCTGACCTGTGGTGGTGGGCTCAGCTAAGGCTGTTTTCAGCTGCAGCACGAGAGACGCACTGACTTGTGTTCAGTTAGTTACTCAAATATGGGTGTTGACAGTGAGCCTTGGTGTGAAGACCCGGCCCACCAGGCAGGGCACCGTGAACAAATGGCCAcagacgcgcacacacacatggccTGCAGCCCTGAACCCTGAGTGGACTCCCATTAAGAGGCACCAATCCGAGTCGAACCCCTCCCCCCGGGCTGGGGTCTTCAGAGTGAACCAGTAGGTGGTCACAAATCACCCGGCGCTCATTCATACCAGAGTGGCCATGGCAGCCTGATGTATTGGGTGTCTCTGTCACTGAGGGCCTTAAAGAATTGGATCACAAAGCCAAGGAGGCATTGAAGGAGCTCTTTCCAGCACTTGCTCGCCAACCTGCAGACCCTGTAGATGAGCAAAACATGCTCCTCACACGCTGAAACCCCAAGCATTCATTCACCGTTAATTAAAGTTACAAATCAAGCCTGCAACAGCTAATGTAGGCATAactgcattaataataacattattattctgATTACTGTAACTCTGCCCCACTGTGACATCACTCCCACATCACCGGGCCGCATTTTCCCTGTCCTGACCGGTTTCCATTCACTCCATTCATCCTCCAGTTTGTATTCTTGTGCTCTGCTTCTGCAggaagaaaccaaaaacaaatatagcTCTACCAAGAGCTCAGAAGGTCAGTGTGCCAGGCTAGGGCTATACAGATCAAAAGGCCAATCTGCCCCCTGAATGGCCTGAGGTTTTAATAAATACTCTGCCGAGCCATGCTGAGCACGgacctgccccccccacccccaggtcTATTCATCAGCTAGACAGCCCTCCCAGTCTTGAACAAAGGGGAGCAGGGCCCTGTGGGCTGGAGCTGGTGATGGAATAAGAACATATAAGAACTGGATGGGATGAACTTCAGACAGGGGTCCATTACGGCCCAGCCCTGATCCTGGCTTCGGCACAGTCTGTCTGGCTGTGTTTAACTCTCAGTGGCTTCACAGTGTCTCCCATCAGGGCCTATACTTTTCAATTCGGTGATGTTTGAAAAATCACCTAGAGTTCATTTAGGATCAGAAACCGTAATCAATAGTCATACAAATTCTGTTATGATTCCCAAGTCCAAAAACCAAAATCAATCAATGCTATCCAAACCAATATATTGAAACATGGCCATAGAGCAATAGCAGGAGAGGACGGTATGGGTTGGGGTTGGGGATGGGGAGTGGTGTTGCCTCATTTCTATAAAGTAGGGCATCCTTCTTGTCTTATCAGCCTAGACATATGAATCCAGTGATGAAGCCCAATGACATACTCCGTTGTTGGCCGTTGCGAAATGAACGTCCTGGAGGGTGTACATTAGTTTGGATTGTGAAGTAATAATTACCCCACAAAGGCACTCATGAATGATTCAGTGGCCTCACTGTGACGCTGGCCAAAAGACCGGCAGGGTAAATGAGTTTCCACAGAAAGATTATTCCTTGTTTTCACCCAAGCCACATTTGCCCTCTGGGAGGAACCTGACAAGAAAAACGGCCAAGGATAGGTGAAAACATGTCTGTGTCGAGCATTGTTTAGATTTTGTATTACATAATTTCTATCCACATCTGAATTGTGTAGTATTTCAGATTAAAGTGGAAGTTTCagcacactgtacaacacaaaatacataaacaatgaaGGTTGCTAAACTTTATCTGAACTCAAGGCTGAAATCTAAGAAAATATTGTagcttgatattttttgcataagTACCAGTGCCGCCGATGGGTTCGACTGATGACACTGATTAAAAACGAAACGATGCATCATAAAATATGACAACCATCTGGGCAATATGTGGATACTCTCACAAATCCTGTCTCTTCTTtagatttaatattaatattagaatGAATGTGACTGCCGAGTGATCAGTGACAGCACTGATGATGAGgactatgcatttgtattttccatttaaatcaaGAGTTTGAGAATAACAGTAGGCCGAGCCCTGAACCCTAAACATAATCCTAGTGAAAATTGTAGCTTAAATAGCCAATCACCACTATAACCAACCTCTAGCCTTAAATGCAGTCCACACGTTCAACCTAAATCAAACCCACAGATATCCACTCACTTTGTTTCCTGTCCTGAATAAACATAGGAATTTGGTCTCTTTAGATTTTGCGAAGCAACTACATGTCAAATCCCACATAATGTTCTGGGGAAAAGGCACAGTTTAAAGAGCACATCGTTCTATGTCGCTAGGATACTTACCCCTCTGCTGTGGTTCACTGGCCAAACCGCTGTGTCGAGAAGGTCTAATTTCTGAATACATGTTTTGCAAAGAATGTCAACGGCAGCCAAGTTCGGGGTCATCCAAAACGCCAAAATAGCTGACTTTCAGAGTATCGCATTCCTTTCAATATTGCGTCTTGTTGTCCACTAAGCCTGCAAAAACACAGCCACTTGGACAGTGTAAACCTGACGAGGACAGAGACAGGCCAGGGACGTTAATGTCTGTTaagcatgtgtttttcatttggtaATTCAAGTACCCACGCTCTGATGccgaataaacaaataaaccacagATAAAGAGGTACACTTTTATTCCCTCCATGTTACTGAAAAGATATTTCCTTTGACCCCATTAGTGTCTTGTGGGTCTGTGACCCTGCTTTGTCATGGTTTACGCATcccataataaatacaaataaatgattgtgtGTACTCCattgtactgtgtgttttgcatgtttatcTCCCTTGGCTGTTTCCACCTGGGCATGTATTCTTTATCAGTGATTTCTTCTAACAAAACCATTTGTTTTGAGTTGTAAAATGATACTAAAAGAAATTACTCCAGGTTCAACGCTCCCATATTTTCCGGGGATGAAAGCTATTTAACTAGCTAGAGCAGGTTGAGAAATGAACCCTGGAACGTGAGTCCTGCCCAGAATGAAATCAGTCTTCAATCCTGTTATCAAATGGCCCTGTTCTGACACTTTTGTGAGCAGTtgctggaggagggagagagggggtcTAGACTTCACTTTAACACTTGTTTGCCCTCCTAAGTTTATTCCTCAAGGtcagtatacatttaaaactaaagaaaacaaacaataatatcaCTGTTTAGATTAGGTCTTAATTTCGGGAAGACAAAAACGCTAAAACATGAAAACcccaataaaaacacaagaatgaCAATTTAATGCAAATAAAGAGGAACCAAAGTTAAGATTTAGAAATAGAGAGCACCGGTAATTCCTCCGATGGGGTTTATCGTTCTCCCTGCGTGTCCGACCTTTGCCTCGGTCAGCCCCAGTGGCTGTACTTGGAAGAGTCCTTGTGCTTCTGAGAATGCAGGTGCTGTCTGCATGTGAGATTACACATGGTGGCCTGCCAAGACTGGTATTTGAACTTAACCATTGACCTGGAGCTTTCCATAATAAGCTGGCCGACTTCCCAGAACCTGCAGTCCTACGGTACGTTGCTGCTGCAGTCGTCGTTTCTCTCTcatactctctctcactcgATTTATTGTCTCTTTTTACAGTGAGATATTGTTGAACTTTGATCCACGTCGGTCTACTTGGTATCTTTCCTGGCCCTCTCCATCCTGAAAAGCAATACTCCATTCTCCAGTGCCTGTGCTACTGCATGCATGTGCTTTTTTGCATTGAACTCTGTCTCTCAGACTCCCCTCATCAGATGGTGGTGTTCAAAACTGCGGCCCAGTTTCACAGATGTTGCTATGTAGGTCAAAGTGACctgctgtttgtctgtttacaGCAGCCACACCAAACTGAGTGTTTGGCTTTTGTGGTGTTTTGCATCAGAGCAAGGCCAAGATCTAGAGTCCCACCAAGACTTTAACTGACAGGTTGACAGAGCCTGACATCAGTCACCGGGGGAGCTCTGACCCAAACCCTGGACACACTGAACATCTTGACATGCAGTTGCATACACGACTGCCTCTCTGTCACTGACAGTGCTCGGCTGAAGTGAATGTCCTTTGAAGCAGTAGCCCTGTGTGTGCCTGCAGGAGTGATGCTAATTCTGGATCAATGCAGTCGTCCCGCAGCTGGGCCTGGCTCTGCAGGGGAGCACTGGAGGTGACCAGGGGATTAGTAATAGGAATCCTCCGGGCCACGATCACCGTCATTAAAAACCAGGGCCCAGCCTCTCTGTCATGTTGTGTTATCCTGCTGCCATTGTGTCGAGTGCCATGACGGCCGGTGGAATGATCCACTACACACCGTCGATGGAGCACAGTGGATATTGTTGGATTGTTTTAAACGTGATGTTTATATCGGACAGACAGGTTAGATCTAATGTTGAGCGACCATTATTATATAGTAAAAAATGCCTGGTTAGGTCCAAAATACTGCCGTTTCCTGCACAATAATGCATATTAGGCTCTCACAGTGGGGTACTGCACTAAGCTACGTGCTTATTCCATCACAGACGCTTTCCCATAGGAGTTCAGATGTGCTGATCCATATGGTGGGAGGGGCTGGAAGTCCTGACCAACGAGTCGCCTTTGGCTGATGATAAAGCACATTCAGGAGATTGCGTCATCGAAGAAGACTCGTTTTAAGGGTGTCTGTTTAAATATAACTCAGACCCTCTAATCCAGTCATTGCAATCATACAGGTCTttgatgtaaaataataatgagcgATTGGCCAGTCTTTAAGGGGATGTTCTTCTATAGTCCTCAACCCTCATCTTAAAAGAAACTGTGGCAGCgcctcccccacccccgctTGGTCTTAGGATCCAGTGTCAGGCTGACTGGAGGGGCTTAGTGCTTAATGACCAGGACAGCCGTGTTGAGTCTCTCAGGCCCAAAGCTTTGTGGGTCCTTTGTAATCAGCCCAGATCTGCCCTTGTTCCAGTGCTTCTGTGCTGCCCCCACACGCCCCCGGGCTACGCTGAGCCATAAAGGGAGTCGAGGACTTCAGGGACCCAGCAGTCAATCGGGACCCGTGGAAGACTCTCGGCTGAGCAGCGGACACCAAATCGGCTTTCCCTTCACTTGCCCATTCATTTTAggtggtgttttttatttacatctgCGTGAAGTACATTTCACTGGATTACCATTCTGTGAGTCTGCTGTATGGGCAGATGTCGTGGGgatgctgtttttattattcactcTTTCTGTGAAACTGACAAACATCAGGAAAATGTAACGACAGTAACAGTGTGttgaatttgaaatgatcaaataaacaaatatatgtggAAAGTGTGACATACGATGGGGTATGAAGTGGGGTTTGAACACTGATTCCTATAATCTGAACATATTCATTGAGGGGTTCCACATACGTACTTCCCTGCCCTCTTTATTCTTGTCAGGCTGCCAACAACGAGTCCCTGATTTTACACAGGATGTTGATTAAGCAGAAACTGCGCCAGATCATTGCTTGAGAAAGGTCATGAGATCATACACTTATGTGACAAACTAAAGTCTCATTGACAAAACCAAACCatcttaaatattaaaatgtgtggaGTATCTGAAGTGTATCTGTTCAGTTTTCATAAGGTATGGGCCAGTTTGTCAGAAAGATTATTCAAAAGCACTATaaactgtgtctctctctcggAGAAAGACAGTAagtggttttaaatgttatattttgtttcacctCTGCACAGAGGTAATCCACAATGCAGAGAAGCTGTCAGTGTTTGCCTGATATTTTATTCCCACTCCTTGTCAGCAGCCtctatttaattataaattgattGCCACATACAGCACTGCAACCTTTCTGTACTGAGAGTAATGGACAAAGAATTGCTCTGAGATTTGCCAGGCCTGGTACTGTTCCTGTATTGGGTCTGGACTGAGCATGAGCCCTTTACCTTAATCGGGGGAAACCCCTTCGAATGGAGGCCTTAGCAAGCCATTGACATGCCCTGTCTGACACTCGGCTGAAGTGGGAATTTAGAAGTGCCTTAGGAAGCACTGTTTTCTACAAGTTTACCCTTTACAACCTCACAGACATTCACATGTAATATCCAGCCTGATTTCTTACATGATAATCGGTATTCAGACAAAGCAGGTGTCCTCGACTGGATCAGACACAGGCAACAGCTGTGCAAGCTTTTACGGTTCAGTTGAGAGGCAGTGAAAGGCTGGAAGTTAAACTTCAGAAACGTACCACTTGCGCAGACAGGATATTGAAAAGCTCACAGAGGAGTTAAAgtctgtgtgtactgtgtgtacaGGATGGAAGCTCATTTGTTAGCTTGTAGTTCCTGGCCCATGTGATCAGACTGTCAATCAAAACAGGCGGCTTTGCTAGTAGGCCAAAGTTCAACAACTGCATTCAGATGCTTGTGGGCAATTAGAGATCTACATGCAAAGCAGCAAAAGACAGGGGTTACTCTAGGCCGACACACTGTTGCTATAGCAAAGCCAGCACACCGCATGTCAATTAAGCCGATACTCTGCCAGCGTATTGCATGAGAAAGGTCATGTAGATCAGCCATGTATATTGTGagcatttttcctttcttttcctttcacCTGAGGTCCAGTAATAGCCGAGTTAAGAGCTGAGCTACACTGTAACGTCCCACCAGTTAAAATTACTTTAGGAGTTTGGACAACCCCAGCAGACGTACGTAGAAGGTAGATTGAGTTTATTCTGGCTGAGGCTCGCTTGACTAAGGGACAGTGACCCGGCCACGAGGACGAGGCCATGGGATCCCTCCCACCAGGTGGAATGAGCCGAGGAACTGCAGCAAAGGCTGTGTTTCGTGTGGGGGAGGGAGGCCAAGCGACAGATGCTGGAAAAGTGTGTTCGTTGACAGATACTTCTGCTTGGAAAAGGCAGAAGTCAGGCGTGAGATTGGGTCTATCTTCCTCCCAAATTTACTGCAGATTATGGTTGTGTGTGGACAACACTACTACCTGGGAGCTTGTACATGAAATTAATATGATGCGATTGTAATCCGAAGTAACCttattattgtactgtattgtccGATGGAAACAACTGTTAAAGGTCATTTGATTTGGACTGAGTTTAAGTGGTGGAATACAGGGTAATTTCTGCGCTTGTTTAACATGGTATCTACAGCAGAATCGTCTCCgtctgtaattaaaaacattaaattgcttCAGTCCCTAAGAGTTTGTCACGGGGCAGACAGGCAATGTAATTACTGCATTAGAGCAATTTCGCTTTAGTAGACATGCACTACAGAAGGCCGATTTTGAGGGTGAATTAGGCAAGCTGGGCAATACAGGTCTTTAAACGTCAGCctagaaatgtgtttgtgtgtgacacTAACTATCACAGTGAGGAGTGGCCCCTGGTGTGACAATGCACACGATGACTAATTATAGAGATACTGTACTAATTATAGACGCCTACCACACAGAATGATGCACACAATATTTTGGCTTTGTAAAATGATCTAGCACGGGAGTTGACGATTCTGCTACTTTTCTGGAGGGg

Function

GO: NA

KEGG:

id description
K03434 PIGL; N-acetylglucosaminylphosphatidylinositol deacetylase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005664 True 9502 mRNA 0.45 2 6582699 6594894

Neighbor

gene id symbol gene type direction distance location
AMCG00005665 NA coding downstream 7068 6571057 ~ 6575631 (-)
AMCG00005672 NA coding downstream 36819 6528567 ~ 6545880 (-)
AMCG00005671 NA coding downstream 55079 6502453 ~ 6527620 (-)
AMCG00005675 NA coding downstream 85038 6497360 ~ 6497661 (-)
AMCG00005673 NA coding downstream 96449 6481066 ~ 6486250 (-)
AMCG00005644 NA coding upstream 95557 6690451 ~ 6704360 (-)
AMCG00005646 NA coding upstream 111764 6706658 ~ 6711986 (-)
AMCG00005645 NA coding upstream 128053 6722947 ~ 6743221 (-)
AMCG00005654 abr,si:ch211-253h3.1,LOC103375456 coding upstream 192966 6787860 ~ 6800839 (-)
AMCG00005655 abr,LOC107731041,LOC107688618,LOC107712163 coding upstream 231035 6825929 ~ 6872866 (-)
G153487 NA non-coding downstream 19129 6560939 ~ 6563570 (-)
G153379 NA non-coding downstream 325527 6240402 ~ 6257172 (-)
G153375 NA non-coding downstream 347290 6235183 ~ 6235409 (-)
G153374 NA non-coding downstream 347841 6234548 ~ 6234858 (-)
G153373 NA non-coding downstream 348340 6234128 ~ 6234359 (-)
G153514 NA non-coding upstream 52422 6647316 ~ 6662496 (-)
G153586 NA non-coding upstream 340536 6935430 ~ 6935676 (-)
G153638 NA non-coding upstream 457911 7052805 ~ 7053559 (-)
G153678 vmp1,LOC105021956,LOC107728773 non-coding upstream 584734 7179628 ~ 7202286 (-)
G153681 NA non-coding upstream 683610 7278504 ~ 7278765 (-)
AMCG00005674 NA other downstream 86128 6490255 ~ 6496571 (-)
AMCG00005628 LOC107090330,LOC102220786 other downstream 348671 6232159 ~ 6234028 (-)
G153342 NA other downstream 499833 6081235 ~ 6082866 (-)
G153130 NA other downstream 1280501 5300769 ~ 5302198 (-)
AMCG00005539 NA other downstream 2289828 4284717 ~ 4292871 (-)
AMCG00005685 NA other upstream 514324 7109218 ~ 7145807 (-)
G153733 auts2 other upstream 1190660 7785554 ~ 7788321 (-)
AMCG00005704 NA other upstream 1404442 7999336 ~ 8001405 (-)
G153806 NA other upstream 1496854 8091748 ~ 8124685 (-)
G154142 NA other upstream 2495528 9090422 ~ 9092573 (-)

Expression


Co-expression Network