AMCG00005668


Basic Information

Item Value
gene id AMCG00005668
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 6551704 ~ 6560667 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005668
ATGGACGCAAACTGCACGACTCCGCATTGGATAATAAGAGCAAGAAACATCATTGAAGACTCGCAGGAGTGGAAGGCATTCACTGCAGAGCTGTTCGAGGCCGTGCAACAGCAGCTGACAGAGAGCCACGTCAGCTTGTTCACCGACCTCTCGGAGGCTGAGAAAACACTGTTTCTTGAGAGAGCGGCAAAAGCAGTTCACAGAGgCACCGCCTACAAGGATATCATCATTCACATTAGCTCCACCCTTGATTATATGCTGAGCAGTTATGTGGCAAAAGAGACAAATGACTGTGGCCCCATATGCACTAAATCAGACCTCTTCCAGACTCACGTCAGAGATGGGATGGTCAGTCTTTTACTAAAGTGGCCGGACATGAAGAGCAAACTGCATGCTCTTTTCAACCATCCCTTACCCTCGGAGGTCAGAAAGGTGGCCTGGAGGCTGTTTCTCTCTAACACGAAGGCTCAGATGGATTACCTGTCACTCATGTCAGTGAACAAAGCCAAGTCTCGGTCTGACTTGGATATCAGCCAGCAGTGTCAGACCCTGCTGTCCAAACAGCCCACCTTCAAGAGTCTGCAGGACAGCGCTCTTGCAGGAAAAGTCATGAAAAACACGCTCTCCTATTACCACAGATATCGGCGTTTTAAGACGGCTCTTCCAGACTCCGAGTCCTTGCTGCTGATCCCGCTGACGCAGGCTGCTGTGGCCGGCTCCACGCCCAGCACCTCAGTGGACTCTATCACCGCCCTGCTGGTGGAAGAATATATCACCTTTATGGACTCCAGGTTGGCATTCATGAGACCTCAGAGCACGGGGGTAGGTTTCTTAAACATGACAACACTGCTGTATATCTGGGATCAGTACATCATTGGACTGGACAGGCCTTCATACAACTGTATTCCTGCTTTTTCCTGTGCTTTCATGCTGCTGCTGAGAGATCGTCTCCTGGCTTGTGGCACGCAAGCTGAGCTGGCGGAGGTCACTCGGGGTCAGGGCCCTGCACTGGCTGTGCGGCAGTTCCAGAACGTCATCAGTAAATATTTCTACGGAGAGCTGTACAGCCAATTAACAAAAGATGAAGCCGAGAGCTTTCCTACTCTGGATCCAACACAAGCCTTTTTCCCCCCTTGGACTCATTTGTCAACCAACGATGTGCCTTTGAGGACACGGCCTCAAGACAGGAGACTGGCAAGAGAAGAACGGGAGGTTCTGAGGGCCAAGCAGACTGAAAGACTGAAGCAGGAACAACAACTGCAGAAGctcagagaagaggaggagatcAGACGAGAGGAGGAGAGACTGCAGAGGCAACTAGAAGAGACTCAGCGCATCAGTAACGAGCAGCGCTTTCTCCTGGAGGAACAGCTGGCTCAGGAAAGGCAGCATCGCTATGAAATCCAGAGGAAAGCAGAGGAGCAAGTTAAGCTGCTTCAGGCTGAAATCGCAAAGATCAAGGAGAAACAGTTGGAAGTGTGTGGTCGCTACCTGGATGCTGAGGAAATGGATCTAATGAAGGAGCCCCTTAAATCTCACCTGAAGAGCAGACTTGCTGCCGCTACGAGAAGACGAGTGGAGGCTCGGTACAGAGCCCAGCTTGGGCAGGGGAGGAGACCGCGGTCACCGGCCATGGGGTTATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005668 True 1644 mRNA 0.52 13 6551704 6560667

Neighbor

gene id symbol gene type direction distance location
AMCG00005670 NA coding upstream 24160 6520852 ~ 6527544 (+)
AMCG00005666 emc6,LOC107553592,LOC107552561 coding upstream 43087 6508285 ~ 6508617 (+)
AMCG00005648 fam222b coding upstream 74881 6467610 ~ 6476823 (+)
AMCG00005649 flot2,LOC103133852 coding upstream 127351 6400618 ~ 6424353 (+)
AMCG00005650 dhrs11,LOC107562199 coding upstream 163211 6376102 ~ 6388493 (+)
AMCG00005669 LOC107676655,LOC107718355,LOC107680877,LOC107553589 coding downstream 7420 6568087 ~ 6570099 (+)
AMCG00005661 ncor1 coding downstream 42318 6602985 ~ 6618586 (+)
AMCG00005662 NA coding downstream 103512 6664179 ~ 6669390 (+)
AMCG00005643 timm22,LOC107595490,LOC107688620,LOC107731058,LOC107740820,LOC107665041,LOC102778162 coding downstream 223495 6784162 ~ 6785859 (+)
AMCG00005630 NA coding downstream 372587 6933254 ~ 6936834 (+)
G153390 NA non-coding upstream 157976 6333252 ~ 6393728 (+)
G153381 NA non-coding upstream 220333 6282988 ~ 6331371 (+)
G153348 LOC107090330,LOC102220786 non-coding upstream 317657 6232159 ~ 6234047 (+)
G153312 NA non-coding upstream 503266 6048130 ~ 6048438 (+)
G153274 NA non-coding upstream 596253 5916835 ~ 5955451 (+)
G153485 NA non-coding downstream 232 6560899 ~ 6563478 (+)
G153626 NA non-coding downstream 541538 7102205 ~ 7157875 (+)
G153687 NA non-coding downstream 736467 7297134 ~ 7297381 (+)
G153689 NA non-coding downstream 737487 7298154 ~ 7298512 (+)
G153702 NA non-coding downstream 799717 7360384 ~ 7361317 (+)
AMCG00005667 NA other upstream 62922 6487718 ~ 6488782 (+)
AMCG00005647 NA other upstream 114626 6434521 ~ 6437078 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 1309928 5214813 ~ 5241776 (+)
AMCG00005546 acaca,LOC107691719 other upstream 1988684 4560213 ~ 4563020 (+)
AMCG00005538 NA other upstream 2246548 4282517 ~ 4305156 (+)
AMCG00005663 NA other downstream 47976 6608643 ~ 6662480 (+)
G153675 NA other downstream 700010 7260677 ~ 7265971 (+)
AMCG00005694 NA other downstream 746391 7307058 ~ 7334571 (+)
AMCG00005660 LOC106603524 other downstream 1188516 7749183 ~ 7787871 (+)
G153815 NA other downstream 1653237 8213904 ~ 8230590 (+)

Expression


Co-expression Network