Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00005674 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 6490255 ~ 6496571 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00005674 | False | 408 | mRNA | 0.51 | 1 | 6490908 | 6491315 |
| TU193235 | True | 728 | TUCP | 0.48 | 3 | 6490255 | 6496571 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005673 | NA | coding | downstream | 4005 | 6481066 ~ 6486250 (-) |
| AMCG00005651 | NA | coding | downstream | 47889 | 6433714 ~ 6442366 (-) |
| AMCG00005652 | NA | coding | downstream | 57958 | 6425603 ~ 6432297 (-) |
| AMCG00005653 | LOC107387056,LOC104963922,LOC107090352,LOC103133851,LOC106956654 | coding | downstream | 91746 | 6390296 ~ 6398509 (-) |
| AMCG00005641 | myo19 | coding | downstream | 150422 | 6334287 ~ 6339833 (-) |
| AMCG00005675 | NA | coding | upstream | 789 | 6497360 ~ 6497661 (-) |
| AMCG00005671 | NA | coding | upstream | 5882 | 6502453 ~ 6527620 (-) |
| AMCG00005672 | NA | coding | upstream | 31996 | 6528567 ~ 6545880 (-) |
| AMCG00005665 | NA | coding | upstream | 74486 | 6571057 ~ 6575631 (-) |
| AMCG00005664 | NA | coding | upstream | 86128 | 6582699 ~ 6594894 (-) |
| G153379 | NA | non-coding | downstream | 233083 | 6240402 ~ 6257172 (-) |
| G153375 | NA | non-coding | downstream | 254846 | 6235183 ~ 6235409 (-) |
| G153374 | NA | non-coding | downstream | 255397 | 6234548 ~ 6234858 (-) |
| G153373 | NA | non-coding | downstream | 255896 | 6234128 ~ 6234359 (-) |
| G153324 | NA | non-coding | downstream | 421241 | 6068787 ~ 6069014 (-) |
| G153487 | NA | non-coding | upstream | 64368 | 6560939 ~ 6563570 (-) |
| G153514 | NA | non-coding | upstream | 150745 | 6647316 ~ 6662496 (-) |
| G153586 | NA | non-coding | upstream | 438859 | 6935430 ~ 6935676 (-) |
| G153638 | NA | non-coding | upstream | 556234 | 7052805 ~ 7053559 (-) |
| G153678 | vmp1,LOC105021956,LOC107728773 | non-coding | upstream | 683057 | 7179628 ~ 7202286 (-) |
| AMCG00005628 | LOC107090330,LOC102220786 | other | downstream | 256227 | 6232159 ~ 6234028 (-) |
| G153342 | NA | other | downstream | 407389 | 6081235 ~ 6082866 (-) |
| G153130 | NA | other | downstream | 1188057 | 5300769 ~ 5302198 (-) |
| AMCG00005539 | NA | other | downstream | 2197384 | 4284717 ~ 4292871 (-) |
| AMCG00005560 | LOC106568075,LOC104946632,LOC106603282 | other | downstream | 2621046 | 3850136 ~ 3869209 (-) |
| AMCG00005685 | NA | other | upstream | 612647 | 7109218 ~ 7145807 (-) |
| G153733 | auts2 | other | upstream | 1288983 | 7785554 ~ 7788321 (-) |
| AMCG00005704 | NA | other | upstream | 1502765 | 7999336 ~ 8001405 (-) |
| G153806 | NA | other | upstream | 1595177 | 8091748 ~ 8124685 (-) |
| G154142 | NA | other | upstream | 2593851 | 9090422 ~ 9092573 (-) |
