AMCG00005689


Basic Information

Item Value
gene id AMCG00005689
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 7215353 ~ 7215643 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005689
ATGGCCCGCGCCGCACGGCTCTCGGGCGCCGATCCCGATGATGAGGACTACGAGGAATTCGAGGAGATGCTGGAACACGCCGAGACTGCTCAGGTGACCGCCTCCAGcttcccctttctctctctctctctctctttctcatgcACGATTTCTGCATTCCCAACACTTTCAcaaccaccaccccccaccctgaaAGATAAAGAGCGGCCTGGCTGTTCGGAGGCGCGATGCACGTGCTCCGTGTGTAAACCTCCGTGTGTCATGCAGCAGTCTTTTGAACAACGTGGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005689 True 291 mRNA 0.58 1 7215353 7215643

Neighbor

gene id symbol gene type direction distance location
AMCG00005683 rps6kb1b,LOC108443350,LOC107701421 coding downstream 45964 7157197 ~ 7169389 (-)
AMCG00005684 LOC107747042,LOC107744626,LOC107699258,LOC107693951,LOC103378375,LOC104941230,LOC107726096,LOC103364401 coding downstream 107579 7102290 ~ 7107774 (-)
AMCG00005679 med13a,LOC104957374 coding downstream 138049 7053710 ~ 7077304 (-)
AMCG00005680 ints2,LOC107744627 coding downstream 166871 7037683 ~ 7048482 (-)
AMCG00005677 NA coding downstream 178297 7024185 ~ 7037056 (-)
AMCG00005687 NA coding upstream 14263 7229906 ~ 7232875 (-)
AMCG00005688 cltc,cltcb,LOC108443353,LOC105907438 coding upstream 28307 7243950 ~ 7276480 (-)
AMCG00005659 NA coding upstream 65977 7281620 ~ 7292372 (-)
AMCG00005698 NA coding upstream 252048 7467691 ~ 7468500 (-)
AMCG00005691 caln1,LOC107716051,LOC107659935,LOC107582596,LOC107672359,LOC107554278,LOC103034584 coding upstream 605551 7821194 ~ 7828552 (-)
G153678 vmp1,LOC105021956,LOC107728773 non-coding downstream 13067 7179628 ~ 7202286 (-)
G153638 NA non-coding downstream 161794 7052805 ~ 7053559 (-)
G153586 NA non-coding downstream 279677 6935430 ~ 6935676 (-)
G153514 NA non-coding downstream 552857 6647316 ~ 6662496 (-)
G153487 NA non-coding downstream 651783 6560939 ~ 6563570 (-)
G153681 NA non-coding upstream 62861 7278504 ~ 7278765 (-)
G153742 NA non-coding upstream 659144 7874787 ~ 7875042 (-)
G153778 cct6a non-coding upstream 766387 7982030 ~ 7983931 (-)
G153779 NA non-coding upstream 768597 7984240 ~ 8021640 (-)
G153980 NA non-coding upstream 1358549 8574192 ~ 8588222 (-)
AMCG00005685 NA other downstream 69546 7109218 ~ 7145807 (-)
AMCG00005674 NA other downstream 718782 6490255 ~ 6496571 (-)
AMCG00005628 LOC107090330,LOC102220786 other downstream 981325 6232159 ~ 6234028 (-)
G153342 NA other downstream 1132487 6081235 ~ 6082866 (-)
G153130 NA other downstream 1913155 5300769 ~ 5302198 (-)
G153733 auts2 other upstream 569911 7785554 ~ 7788321 (-)
AMCG00005704 NA other upstream 783693 7999336 ~ 8001405 (-)
G153806 NA other upstream 876105 8091748 ~ 8124685 (-)
G154142 NA other upstream 1874779 9090422 ~ 9092573 (-)
G154250 NA other upstream 2209647 9425290 ~ 9434940 (-)

Expression


Co-expression Network