AMCG00005698


Basic Information

Item Value
gene id AMCG00005698
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 7467691 ~ 7468500 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005698
ATGTCTGACAGGAGGGCCCGTGTCCGGCACAGGATCACCCAGCAGGAGGCTGTGCCACACCACAGCCGCTCAGAGGGGTATGGCCTGCGCAGGAGGGAACGGCTGAGCTACATGCAGGAGCTGGACCTGAGGGACGATGACTACCTGTTCTTCGAGGAGAGCCAGGCCCTCTTCCTGGACGAGTGCGAGGTCCATGGCTTCCCCCTCTTCGGCTCGGCTCACTCTTACCTGGGCCTGAGTGTGCGGGAGTCTGGCATCCCTGGTGCGGGCCTGGGGGTGTTCAACCAGGGCGCCCTCATCCCCAGAGGAGTGCACTATGGGCCCTACAAGGAGCAGCTGGCCAGTGAGGAGGCGGCCGTGGCCAGTGGTTACTCTTGGGTGGTGAGTCTCACCGACATCTGCACTGGAGCCCAGCCTGGTCTCTGTAGCCCTGACTCGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005698 True 441 mRNA 0.64 4 7467691 7468500

Neighbor

gene id symbol gene type direction distance location
AMCG00005659 NA coding downstream 175319 7281620 ~ 7292372 (-)
AMCG00005688 cltc,cltcb,LOC108443353,LOC105907438 coding downstream 191211 7243950 ~ 7276480 (-)
AMCG00005687 NA coding downstream 234816 7229906 ~ 7232875 (-)
AMCG00005689 NA coding downstream 252048 7215353 ~ 7215643 (-)
AMCG00005683 rps6kb1b,LOC108443350,LOC107701421 coding downstream 298302 7157197 ~ 7169389 (-)
AMCG00005691 caln1,LOC107716051,LOC107659935,LOC107582596,LOC107672359,LOC107554278,LOC103034584 coding upstream 352694 7821194 ~ 7828552 (-)
AMCG00005692 caln1,LOC108277467,LOC107582596,LOC107554278,LOC107672359 coding upstream 384166 7852666 ~ 7869220 (-)
AMCG00005718 NA coding upstream 427846 7896346 ~ 7901372 (-)
AMCG00005715 LOC102799651,LOC107659914,LOC104957508 coding upstream 450179 7918679 ~ 7950134 (-)
AMCG00005716 NA coding upstream 485631 7954131 ~ 7966260 (-)
G153681 NA non-coding downstream 188926 7278504 ~ 7278765 (-)
G153678 vmp1,LOC105021956,LOC107728773 non-coding downstream 265405 7179628 ~ 7202286 (-)
G153638 NA non-coding downstream 414132 7052805 ~ 7053559 (-)
G153586 NA non-coding downstream 532015 6935430 ~ 6935676 (-)
G153514 NA non-coding downstream 805195 6647316 ~ 6662496 (-)
G153742 NA non-coding upstream 406287 7874787 ~ 7875042 (-)
G153778 cct6a non-coding upstream 513530 7982030 ~ 7983931 (-)
G153779 NA non-coding upstream 515740 7984240 ~ 8021640 (-)
G153980 NA non-coding upstream 1105692 8574192 ~ 8588222 (-)
G154010 NA non-coding upstream 1261303 8729803 ~ 8730149 (-)
AMCG00005685 NA other downstream 321884 7109218 ~ 7145807 (-)
AMCG00005674 NA other downstream 971120 6490255 ~ 6496571 (-)
AMCG00005628 LOC107090330,LOC102220786 other downstream 1233663 6232159 ~ 6234028 (-)
G153342 NA other downstream 1384825 6081235 ~ 6082866 (-)
G153130 NA other downstream 2165493 5300769 ~ 5302198 (-)
G153733 auts2 other upstream 317054 7785554 ~ 7788321 (-)
AMCG00005704 NA other upstream 530836 7999336 ~ 8001405 (-)
G153806 NA other upstream 623248 8091748 ~ 8124685 (-)
G154142 NA other upstream 1621922 9090422 ~ 9092573 (-)
G154250 NA other upstream 1956790 9425290 ~ 9434940 (-)

Expression


Co-expression Network