AMCG00005709


Basic Information

Item Value
gene id AMCG00005709
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8201620 ~ 8216650 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005709
atggtGACACCATGTGGGAAGGCACAGGAGAATCTGAGAGGCAACGACTCgggaaacagacacagagagATCTCACTCTTTCGCTTCTTCCGCTCCATCGCTCACGGGTCTTCTGTGGTCCACTGGCCAATTGCTGTTCTTCAGCTAGTCAGGCGAGAACATGTGATGAAAGGCTACGGACAGGGCGGGTTAGGAGCGGGAGGCCTGGGTGGTGCTGGATTAGTGCCAGGAGGACTGGGGAAGGCCTACAAACCTGCAGGTTACGGCCAAGGAGCCTATGGGGCTGGGGGTTTTTTCCCGGGAGCTGGAGGATTGGGAGTGGGAGTGAAGCCTCCTAAGACAGGTACAATCCCAGGAAGCTTTGCAACACGGATCAGAAAGACTGCCTTGGTGGAGCAGGTCAGCCGGTGCCCGGAGTCCTGCCTGGGACAGTTCCTGGCGCAGGAGGGACGGGGGTTGGGGGAGCCGGAGGGACTCAGCCAGGGCTGCTACCAGGAGGCATTCCCCAGACTGGCCTTCCCCAGGCAGGGCTGGGAGCTGGAGGAAAAGCCCCAAAAGTGCCAGGTGTGGGAGTTCCAGGAATCTACCAAGGTGGCGTCCTCCCTGGACAAGATGCTGGCGCTGACGGTGGAGTGTATGGTGGCTACCGCGGTGGATACGGAGGGCCGAGGCAGCCGGGAGTCTTCTATGGGTGCCTTTGGATCTCAGTACGGAGGCAAACTTCCATACGgtTATGGAGGCTATGGAGCTGGACTGGGAGGAGCGACTGGACTGGGAGGAGCAACTGGACTGGGAGGAGTGACTGGACTGGGAGGAGCGACTGGGCTGCCCGGTGGAGGAGTAGCAGGGGCAGGAACGAAGCCAGGATACCCCACCGGCACTGGTGTGGGGCTGCAGGGGTTGTCTCCAGCGCAAGCCAAAGCTGCTAAATACGGTGCTGCTTATCCCGGAGGACTGGGGGTGCCCGTCGGGGGGGTGTACCAGCCAGGGGGCTTGTATCCCGGAGGCTATGGCCAGGCCGGCGCTAAAGCAGCCAAATATGGTATGGACCTCTTCTCATTCACAGTCCGAGTGTGCCCGGGCAAGTGCCGGGGGCTGGCGTGTCTGGCATACCAGGGGCTGTGCCGGGAGTTGTGCCGGGGGTTGTGCCGGGGGTTGTCCCGGGAACAGCTGGGACAGGAGTACCAGTTCTTCCAGGGGGGAAACCAGTTGCCACAGGGGTTGTTCAACcagGTGGAGTCGGTGTCGTACAGCCAGGTTCTGGAGTTCTGCAGCCAGGTTCTGCACCCTGCACCCCTGTCCCTGTCTACCATCTCCTACTTCTGCTTTTGTCTGCCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005709 True 1341 mRNA 0.61 19 8201620 8216650

Neighbor

gene id symbol gene type direction distance location
AMCG00005731 NA coding upstream 99713 8101296 ~ 8101907 (+)
AMCG00005732 NA coding upstream 101442 8099795 ~ 8100178 (+)
AMCG00005730 NA coding upstream 109152 8058166 ~ 8092468 (+)
AMCG00005700 NA coding upstream 179992 8003546 ~ 8021628 (+)
AMCG00005712 sumf2,LOC107756135,LOC107700040,LOC107669403,LOC107715344,LOC107548208,LOC107567178 coding upstream 212245 7986521 ~ 7989375 (+)
AMCG00005708 NA coding downstream 140 8216790 ~ 8230590 (+)
AMCG00005707 NA coding downstream 31058 8247708 ~ 8275344 (+)
AMCG00005705 LOC108424102,LOC106612835,LOC101169222 coding downstream 110411 8327061 ~ 8341359 (+)
AMCG00005721 vps53 coding downstream 291395 8508045 ~ 8523947 (+)
AMCG00005719 NA coding downstream 334455 8551105 ~ 8558820 (+)
G153747 NA non-coding upstream 313840 7887566 ~ 7887780 (+)
G153702 NA non-coding upstream 840303 7360384 ~ 7361317 (+)
G153689 NA non-coding upstream 903108 7298154 ~ 7298512 (+)
G153687 NA non-coding upstream 904239 7297134 ~ 7297381 (+)
G153626 NA non-coding upstream 1043745 7102205 ~ 7157875 (+)
G153816 NA non-coding downstream 34651 8251301 ~ 8278074 (+)
G153859 NA non-coding downstream 129028 8345678 ~ 8351749 (+)
G153955 NA non-coding downstream 513153 8729803 ~ 8730155 (+)
G154025 NA non-coding downstream 565339 8781989 ~ 8805304 (+)
G154030 NA non-coding downstream 577177 8793827 ~ 8796424 (+)
AMCG00005660 LOC106603524 other upstream 413749 7749183 ~ 7787871 (+)
AMCG00005694 NA other upstream 867049 7307058 ~ 7334571 (+)
G153675 NA other upstream 935649 7260677 ~ 7265971 (+)
AMCG00005663 NA other upstream 1539140 6608643 ~ 6662480 (+)
AMCG00005667 NA other upstream 1712838 6487718 ~ 6488782 (+)
AMCG00005720 NA other downstream 281852 8498502 ~ 8507097 (+)
AMCG00005787 NA other downstream 611928 8828578 ~ 8854100 (+)
G154251 NA other downstream 1219250 9435900 ~ 9438269 (+)
G154283 NA other downstream 1371152 9587802 ~ 9589798 (+)
G154330 NA other downstream 1664732 9881382 ~ 9883955 (+)

Expression


Co-expression Network