AMCG00005719


Basic Information

Item Value
gene id AMCG00005719
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8551105 ~ 8558820 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005719
tgtgtgtgtgtgtgtctgtgcgcatgcatgcattttctccaccccccaaaaatctTGGGTAATATATCCCTCTGCGTGGAATTGAGAGCGATTGAAATAAACTGGGCATCTGAGCTTTCAAACAGCACAGCAGCTGCACCACGCAAGACCAGGATCCAGTCaggtcagatgtgtgtgtgtgtgtgtgtgtgcgtgcatgctctgggtgggggggtgaagtCTGTACAAAGTGAAGCAACACAATTGGCTCCGCGCCTCTGTTGATATAGTTAGCCTGGTGTCttgggctgctgctgctgctcgcCTCCGCAGCCGCCCGTGTTTCATCGTATCATCATTCACATCCATCTCAGTGGAGGCTCTGATTGCCGGCCAGGTGTCCGTCCCCGCCTCTCCGCGGGATAAACGCGTCCAGACGCCGCGCACAGCAGCCGGAGCGCCGCCTCGGATCCGCTCGTTTGCAACATTTCTGCCTTCTCTTGTGCAGGAGCAGCTGCGCCTCCCCGCCTCCGTGCAGAAAAGTGCTCGACCGCTGTGGGTTACATTTCCGTTGCATTgcatcccccccgccccccctgtCATTCATGCACCACGTTACCTGTGAATGAACTGCAGGAGGAAGacgccagtttttttttttaaaatgcagcttagtaaaatcacacttttttcactgttttgcaAAAACTTGGCGTCTGTGGTCAGCTTGCGAGATTGACCTGCACCGGCGAGCCCAGGTGATGCGCGCTGCACCCTCCTCTCCGGCTGCGTCTGGCTGATCTGGCCGACTGACTCAATACACCCCGCCGGCGTCTCCTCTCCGTGCGATGCTGGGATGGCTCGCCGCGGTTGGCATCCTGGTAGCGCTGGTCCTGCTCTGGCCGGCCACCCGACACCTGGCATCGGGCGCCCTCACCGCGGCACTGCTGAGCGGCTGGGGACCCAAGCTGTCGGACAGGTGCGTCTCGGATCCCGCAGCCGTGTCCCTGGTTTGCAAGCCCTCCGCTCTGGCCAACTACCTGCTCAAGCACTGTGCCACCTTCCGCCGCTTCGGCACGGGTCCGGGCTGGGGCTGGAGGGCGAGCCCCTTGCTGCAGACGCTGCTGGCCGTGTGCTGGCCCTCGGCGAGTGCGGTGCGCTTCGTGCGGGACTACCTGCAGCTGGGCGACGAGGGGCTGGTGGCGCTGGACTGGGCGGTGGCCGGGGCCGCGGGGGGCCACAAGCGGAGGAGGACCTCCAGCAACTCCACTAACCCGGTGCTGCTGGTCATCCCCAACTCCTTCGGCAAAATCACCGGCAACGTCCTGAAGTTGTGTGAGGTGGCCCTTGGTCATGGATACCTGCCCGTGGTGTTCAACCGGCGCAGCCAGAACGGCACCCCGCTCACCACGCCGCGGCTACAGCAGTTCGGCGACCCGGCGGACCTGCGCGAGGCGGTGCGCTACATCCGCTACCGGCAGCCCTCGGGCCGGCTGTACGCTGTGAGCGAGAGCTCGGGCTCCGGCCTGCTGCTGTCCTACCTGGGGGAGTGCGGCTCCTCCAGCTACGTCACGGCCGCCGCCTGCCTGTCGCCCCTCTTCCGCTGCCAGAGCTGGTTCGAGGACGGGCCCCCGTGGCTCTACCGCTGGGCCCTGCTGCTCTACCAGAAGATCAGCCTGAGCAGgtACCGGACGGCCCTGGGGGAGGCGCTGCAGGTGGATCAGCTGTTCTGCAGCCGCACCCTGCGGGGGGTGGAGGAGACCCTGTTCTGCCAGCCGGGGCAGCCGGGGGGCTCGGCGGTGGCCAACTGGGAAGCCTACTGGGAGCGCAACGACCCCCTGCGGGACGTGGACGAGGTGGCGATCCCGGTGCTGGCACTCTGCAGCCAGGACGACCCGGTGCGCGGGGAGCCCGGCTCCACGCTGCCGCTCGAGCTCTTCGAGACCAACCCCCACTTCTTCCTGCTGCTCACGGCGCAGGGCGGCCACTGCGGCTTCTCGGcggagggcgagggcgagggcggcCCACTGTGGAGTCACCGGGCCCTACTGGAGTTCTTCCGCTCCACCACGGACTTCTTCGCGGCCGAGGAGCGCGCCAAGCAGGCGGCACGGCGCCGGGGGCTGGGGGGCGGCGTCGGCGCCAGGGGCTTCCGGCACCGCAGCGTCAGCACCTGCAAGCGGCTGCCCACCTGCTCACACAACATCCACGCCATCTACAGCTGGCAGAGGTCCTACACCAGGTGACCGGCAGCTTCTCACTCCCCACACACCCACTTCACCAGGACGGACCCCCCTGGGCATCACACAGGGCAGCGTGGGTGCGCTCTGTCACTCCACCACTGGTGTACCAGACCCAGGATATCAACCGTAAAGGATGCGTTTTATACATTACTAACATTTTTTTGGGAGGAGGGTGTCGGGACAGGATAGTCCAGCTCTCTTGGTGAAAGTGGTGAAACTCAACATCCAATAAGAGACACGGACACTGCAGCACACATGTAAATGGaatctggtgtgtgtgtgtgtgtcagagctaGGAGATGAACCTTTCCTCTCCCACTGTTCGattcatatttgtgtatttggcATGTGCCCCCCCCAATCCTGTTGAATGGAAGGTGTTCACAGTGCGTCTGACCAGCCCTGAAGACATTGAGGACCACGTGTGCGAAGCCTGTTGGCACAGCTGGGTGTAGCCAGTCTGTGGTTTTTCAAATCCTGTTATTCAGCCCTGGTTTGTATGGAGACGTGTCTTTTAAAAGGACAGTGTTtgtgtacacatatatatatattttttccgcTTGGTACCATTGTGTGTGGAGGATTTTGAGCACTTATCCTAATAAAGAACGTCTATTTAAAGTGG

Function

GO: NA

KEGG:

id description
K13707 ABHD15; abhydrolase domain-containing protein 15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005719 True 2847 mRNA 0.62 3 8551105 8558820

Neighbor

gene id symbol gene type direction distance location
AMCG00005721 vps53 coding upstream 27158 8508045 ~ 8523947 (+)
AMCG00005705 LOC108424102,LOC106612835,LOC101169222 coding upstream 209746 8327061 ~ 8341359 (+)
AMCG00005707 NA coding upstream 275761 8247708 ~ 8275344 (+)
AMCG00005708 NA coding upstream 320515 8216790 ~ 8230590 (+)
AMCG00005709 NA coding upstream 334455 8201620 ~ 8216650 (+)
AMCG00005736 NA coding downstream 40940 8599760 ~ 8602730 (+)
AMCG00005737 NA coding downstream 56545 8615365 ~ 8615952 (+)
AMCG00005735 NA coding downstream 102987 8661807 ~ 8667423 (+)
AMCG00005738 NA coding downstream 114300 8673120 ~ 8674817 (+)
AMCG00005756 crybb1,LOC105898201,LOC102220912,LOC106612853 coding downstream 136326 8695146 ~ 8696988 (+)
G153859 NA non-coding upstream 199356 8345678 ~ 8351749 (+)
G153816 NA non-coding upstream 273031 8251301 ~ 8278074 (+)
G153747 NA non-coding upstream 663325 7887566 ~ 7887780 (+)
G153702 NA non-coding upstream 1189788 7360384 ~ 7361317 (+)
G153689 NA non-coding upstream 1252593 7298154 ~ 7298512 (+)
G153955 NA non-coding downstream 170983 8729803 ~ 8730155 (+)
G154025 NA non-coding downstream 223169 8781989 ~ 8805304 (+)
G154030 NA non-coding downstream 235007 8793827 ~ 8796424 (+)
G154091 NA non-coding downstream 463130 9021950 ~ 9071747 (+)
G154143 NA non-coding downstream 535089 9093909 ~ 9094670 (+)
AMCG00005720 NA other upstream 44008 8498502 ~ 8507097 (+)
G153815 NA other upstream 320515 8213904 ~ 8230590 (+)
AMCG00005660 LOC106603524 other upstream 763234 7749183 ~ 7787871 (+)
AMCG00005694 NA other upstream 1216534 7307058 ~ 7334571 (+)
G153675 NA other upstream 1285134 7260677 ~ 7265971 (+)
AMCG00005787 NA other downstream 269758 8828578 ~ 8854100 (+)
G154251 NA other downstream 877080 9435900 ~ 9438269 (+)
G154283 NA other downstream 1028982 9587802 ~ 9589798 (+)
G154330 NA other downstream 1322562 9881382 ~ 9883955 (+)
AMCG00005802 NA other downstream 1506340 10065160 ~ 10089769 (+)

Expression


Co-expression Network