AMCG00005722


Basic Information

Item Value
gene id AMCG00005722
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8528521 ~ 8529862 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005722
ATGTCTGCTTGTCccgggagagagagggacccGGCGGCCGCTGCAGGGACGGGCAAGGACAAGGGTCCGGGCTCGGCCGGCCGGGAGAAGAAGAcgacaaagaagaagaagaaagacaagGTGAAGGAGAAGAGGAAACCGGCCGGCGAGTCCAAGAAGAGACCGGACCATGACCTCCCCGCCCCACCATCGCTGCAGCTCAGCCCAGCAGCAACAGAAACCCTAGGAGACAAACCCTCCAGGGCCAAGAGTCAGGGCCGCAGCCGGGCGGAGAGGGGCCCCGGGAAGCCCAGAAAGCGCCAGGAGGTGGTGGCGGCGGAGGCGAAGGATGGCCCTCCCCCGGAGCCCGTGCCAGTGTCCAGCCAGAGCGACGACCTCAGTATCCAGGCCAGGGAGAGTCTGCGCTGGGAGGGCGTGCTGGAGGACCCTGCTGCCGAGGAAGAGAGGATCCAAATCTACAAAGCCAACCGGAGGAAGAGATACGAAGCCGCCCAGCAGGGTTTGTACCAAGatcagggggtggggggcagacAGGGGGATCTGCTTGGCGCTGAGAGTTCAGGGGTCCCCAGCAGCACCCAGAACAGAGGCTGTAACCAGCAGGGACTTCAGTACAACATGCCTGTTAAGGACCCCGCGGGCCCCGGGACGGTTAGACGAGCTGGCTGTGCAGATGCCCGAGATTAA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005722 True 687 mRNA 0.64 2 8528521 8529862

Neighbor

gene id symbol gene type direction distance location
AMCG00005725 LOC106939373,LOC106581044,LOC102781004 coding downstream 50235 8476286 ~ 8478286 (-)
AMCG00005728 NA coding downstream 58405 8468954 ~ 8470116 (-)
AMCG00005727 NA coding downstream 63365 8464290 ~ 8465156 (-)
AMCG00005723 cluh coding downstream 66977 8442122 ~ 8461544 (-)
AMCG00005726 pafah1b1,LOC107585584,LOC107743664,LOC107744786,LOC107664934 coding downstream 110712 8404974 ~ 8417809 (-)
AMCG00005739 NA coding upstream 76421 8606283 ~ 8608058 (-)
AMCG00005741 gosr1 coding upstream 107938 8637800 ~ 8641690 (-)
AMCG00005740 NA coding upstream 115726 8645588 ~ 8661179 (-)
AMCG00005758 cryba1a,LOC103042223,LOC107743738,LOC107669750,LOC105898204,LOC103145583 coding upstream 158692 8688554 ~ 8691731 (-)
AMCG00005761 NA coding upstream 191991 8721853 ~ 8728092 (-)
G153779 NA non-coding downstream 506881 7984240 ~ 8021640 (-)
G153778 cct6a non-coding downstream 544590 7982030 ~ 7983931 (-)
G153742 NA non-coding downstream 653479 7874787 ~ 7875042 (-)
G153681 NA non-coding downstream 1249756 7278504 ~ 7278765 (-)
G153678 vmp1,LOC105021956,LOC107728773 non-coding downstream 1326235 7179628 ~ 7202286 (-)
G153980 NA non-coding upstream 44330 8574192 ~ 8588222 (-)
G154010 NA non-coding upstream 199941 8729803 ~ 8730149 (-)
G154126 NA non-coding upstream 457419 8987281 ~ 9024879 (-)
G154150 NA non-coding upstream 565809 9095671 ~ 9108363 (-)
G154157 blmh,LOC106612652 non-coding upstream 598908 9128770 ~ 9139826 (-)
G153806 NA other downstream 403836 8091748 ~ 8124685 (-)
AMCG00005704 NA other downstream 527116 7999336 ~ 8001405 (-)
G153733 auts2 other downstream 740200 7785554 ~ 7788321 (-)
AMCG00005685 NA other downstream 1382714 7109218 ~ 7145807 (-)
AMCG00005674 NA other downstream 2031950 6490255 ~ 6496571 (-)
G154142 NA other upstream 560560 9090422 ~ 9092573 (-)
G154250 NA other upstream 895428 9425290 ~ 9434940 (-)
AMCG00005850 NA other upstream 1765737 10295599 ~ 10352782 (-)
AMCG00005862 NA other upstream 2013672 10543534 ~ 10551355 (-)
AMCG00005839 LOC103367321,LOC107729686,LOC103398303 other upstream 2208682 10738544 ~ 10752114 (-)

Expression


Co-expression Network