AMCG00005727


Basic Information

Item Value
gene id AMCG00005727
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8464290 ~ 8465156 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005727
ATGGTGTCTGCCGCTGGGTGCCAGAGAGTCCAGGGTTTGAGCCACTGCTGGGAggggtttaaaaaaagtttgaaagatACACTGatctgtctccctgtgtctcccCGCCCAGAggtgcaggaggaggaggagctgctggCGGAGAGGTGCCGACTGGTGGAGCTGCGCCTTGGTGAGCAAGAGTGCAGCCTGGGGGAGCTTGGCAAGGAGCTGAGCCACAAGGGGGCGCTGGTGGAGGCTCTGAGGGCCAGCCTGAAGGACAAGGAGCGCCGCttcctggaggagctgaagcGCCGGAGCCACAAGATCACGGTGCTCAACACCGAGCTGCAGAAGCAGACCGAGGCGGCGGCCTACCTCTCCTTCCAGCTGCATGCCGCCCGCCAGAAACTGCACCATCAACAGCACCGCCACCGGCATGGTGCGCGCGGCACTGAGAGTCTTCCCCTGCCCCCTCCACCGCCACCACCTACCGCCGCCACCACCGCCGCCACCACCGCAGCCAAGCCCCGCCGCCGCGGTCACAAGCCCTCGGCCCACCTGCGCGCCGAGAGGGCCCGGGAGTGTGTGCCGTGCGAGAGGGTGAGCGGCCCCGAGGAGCCCTGCGCCATGCCCGACCCCGCGCTCTTCCTGCACCCCCGCCGGCACCGGCCCCGGCTGCGCAAAAACGCCACCACGGCCACCCACAGACAGCGCGGCGCAGGCAGGCCGGCCCccggagagggagagggagagggagagggagagggagagggagacagggccACAGGAGGAGGCCGGGCACGGAGTGAGAGTCGGGGCCATGAGGAAGGAACCGCCATCTCTCCTCGTCCCCCGACTGCCGAGGAGGAGCAGGCCGAGCAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005727 True 867 mRNA 0.69 1 8464290 8465156

Neighbor

gene id symbol gene type direction distance location
AMCG00005723 cluh coding downstream 2746 8442122 ~ 8461544 (-)
AMCG00005726 pafah1b1,LOC107585584,LOC107743664,LOC107744786,LOC107664934 coding downstream 46481 8404974 ~ 8417809 (-)
AMCG00005729 NA coding downstream 59420 8404357 ~ 8404870 (-)
AMCG00005724 mettl16,LOC102789714,LOC107585611 coding downstream 65765 8377236 ~ 8398525 (-)
AMCG00005706 LOC108431303,LOC105027537,LOC106602836,LOC103362281 coding downstream 101227 8346160 ~ 8363063 (-)
AMCG00005728 NA coding upstream 3798 8468954 ~ 8470116 (-)
AMCG00005725 LOC106939373,LOC106581044,LOC102781004 coding upstream 11130 8476286 ~ 8478286 (-)
AMCG00005722 NA coding upstream 63365 8528521 ~ 8529862 (-)
AMCG00005739 NA coding upstream 141127 8606283 ~ 8608058 (-)
AMCG00005741 gosr1 coding upstream 172644 8637800 ~ 8641690 (-)
G153779 NA non-coding downstream 442650 7984240 ~ 8021640 (-)
G153778 cct6a non-coding downstream 480359 7982030 ~ 7983931 (-)
G153742 NA non-coding downstream 589248 7874787 ~ 7875042 (-)
G153681 NA non-coding downstream 1185525 7278504 ~ 7278765 (-)
G153678 vmp1,LOC105021956,LOC107728773 non-coding downstream 1262004 7179628 ~ 7202286 (-)
G153980 NA non-coding upstream 109036 8574192 ~ 8588222 (-)
G154010 NA non-coding upstream 264647 8729803 ~ 8730149 (-)
G154126 NA non-coding upstream 522125 8987281 ~ 9024879 (-)
G154150 NA non-coding upstream 630515 9095671 ~ 9108363 (-)
G154157 blmh,LOC106612652 non-coding upstream 663614 9128770 ~ 9139826 (-)
G153806 NA other downstream 339605 8091748 ~ 8124685 (-)
AMCG00005704 NA other downstream 462885 7999336 ~ 8001405 (-)
G153733 auts2 other downstream 675969 7785554 ~ 7788321 (-)
AMCG00005685 NA other downstream 1318483 7109218 ~ 7145807 (-)
AMCG00005674 NA other downstream 1967719 6490255 ~ 6496571 (-)
G154142 NA other upstream 625266 9090422 ~ 9092573 (-)
G154250 NA other upstream 960134 9425290 ~ 9434940 (-)
AMCG00005850 NA other upstream 1830443 10295599 ~ 10352782 (-)
AMCG00005862 NA other upstream 2078378 10543534 ~ 10551355 (-)
AMCG00005839 LOC103367321,LOC107729686,LOC103398303 other upstream 2273388 10738544 ~ 10752114 (-)

Expression


Co-expression Network