AMCG00005730


Basic Information

Item Value
gene id AMCG00005730
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8058166 ~ 8092468 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005730
CAGCGAACAGACTCAACAGACTCACCTGTAACAGCACCCAAAACCAGTCGGACCAGTTCCAGTGCCGACAGAGAATCAACTGGAAAATGGATACGCAAGTCGAGGCAAACGAGTGCAGGAGTGGCAGGTGCGCGCTGCACTTGAAATATGACAAGGTGTGTTTCCTGGAACATGCCGCTACAGTCCCGTTCCTTCACCGGCCGCCCCAGACCTCCCTGCGACTCCCGGAGAACCTATGTGAGGGACAGTGCCGTGACGGGATATTAGAGAATAACAGGTGCCCCAGCCTTGTGCGTAATAAGGCGTCACCTGACCTCCTACTGCTGCTCTTAGTGATTGGCATCGTGATTGGCATCCTGGGCATCCTGCTGGGCATCGCCGGCGGCAAGTGCACCAACTGCGTGGAGGACGAGTCATCGAAAGCCAAGGTGGGCATCACAGCGGGCGTGGTCTTCATCATCTCCGGAGTCCTCTGTCTGATCCCTGTCTGCTGGACGGCCAACACCATCATCCGGAACTTCTACAACCCCCTGCTGCTGAGCTCCCAGAAGAGGGAGATCGGGGCGGCGCTGTACATCGGGTGGGGGGCCGCCGCGCTCATGATCATCGGAGGGGCCCTGCTCTGCACCGGCTGCCCGCCCAAGAACCAGCCCTACGCCGCCAAGTACTCTGCCGCCCGCTCAGCCACTTCTGCAACCAAGGACTATTGCACCAACTGCGTGGAGGATGAAGCAGCAAAGGCCAAGCTGGGCATTGTGGCTGGCGTCTTCATAATCATCGCCGGAGTCCTGTGTCTGGTCCCCGTGTCCTGGAGCGCCAATACCATTGTCATGGACTTCTACAACCCCCTGGTCACTGAAGCCCAGAGAAGGGAGTTTGGGCCGGCTATGTACATCGGCTGGGGCGCGTCCATTCTCCTCGTCCTCGGTGGAGCCCTGCTGTGCTGTAACTGCCCACCCAAGGAGAATCGATCTCATTCGGCCAACTATTCCCATAGCCGAGCATTGTCCAAGGATTATTGCCCCCGCAAGGACAACCGGCCCTACACCGCCAAATACTCTGCTGCCAGATCTAACGCCAGTGCAGGCAAGTGCACCAGCTGCATGCAGGACGAGTCGACCATGGCCAAAGTGGTGATCCTGGGCGGCGTGTTTTGCATCGTGGCCGGAGTGCTGTGTCTGATCCCCGTGTGCTGGACGGCTAGCAACATCGTCCTGGATTTCAACAACCCCCTGCTCATCACTACACAGAAAAGAGATATTGGCGCTGCTTTGTACATTGGCTGGGCAAGCTCTGGGCTGCTGCTGCTCGGAGGTGCGATTCTTTGTACTTCCTGTCCTCCCAAAGAAGACGTATACCGTTACGCAGCCAAGTattcgcagtattcctacccaGGAACCGTATGCACCAACTTAATGGAAAATGAGACGTCCAAAGCCAAGGTGGCCATTGCCAGTGGCGTTGTCTTCATCATCTCTGGGATCCTGTGTCTTGTCCCTATCTGCTGGACCACCAACACCATCATCAGGGACTTCTACAACCCTCTGCTCATTGACGCCCAGAGACGGGAGCTGGGCGCCTCTCTGTACATCGGCTGGGGCGCCTCTGCTCTGTTGATCCTCGGTGGAGGCCTGCTCTGCAGCAGCTGTCCCCCCAAAGAGGAAAACTACCCTGTCAAGTACTCCCAAGCGAGATCGACAGCGACCAGCAAAGCTTCAGCAAAAGCCAAGATCTGCATCACGGCTGGCGCTGTCTTCATCACCACCGGCATCCTCTGCCTCATCCCCGTGTCCTGGTCGGCCAACACCATCATCAGGGACTTCTACAACCCCCTGCTCACGGACTACCAGAGAAGGGAGCTGGGCGCCTCTCTGTACATCGGCTGGGGGGCTTCTCTTCTGCTGATCCTGGGAGGGGGGCTGCTGTGCTCCTCCTGCCCACCCAGAGAAGAAAAGAGGCCCGTATACTCTGTCAACTACTCTGCTCCAAGGACAGCGACCCCCACCAAGTCATACATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005730 True 2018 mRNA 0.58 10 8058166 8092468

Neighbor

gene id symbol gene type direction distance location
AMCG00005700 NA coding upstream 36538 8003546 ~ 8021628 (+)
AMCG00005712 sumf2,LOC107756135,LOC107700040,LOC107669403,LOC107715344,LOC107548208,LOC107567178 coding upstream 68791 7986521 ~ 7989375 (+)
AMCG00005711 cct6a coding upstream 73265 7980099 ~ 7984901 (+)
AMCG00005713 nips2,LOC106602830,LOC106581053,LOC105028784 coding upstream 82927 7967451 ~ 7975239 (+)
AMCG00005714 NA coding upstream 92099 7965059 ~ 7966067 (+)
AMCG00005732 NA coding downstream 7327 8099795 ~ 8100178 (+)
AMCG00005731 NA coding downstream 8828 8101296 ~ 8101907 (+)
AMCG00005709 NA coding downstream 109152 8201620 ~ 8216650 (+)
AMCG00005708 NA coding downstream 124322 8216790 ~ 8230590 (+)
AMCG00005707 NA coding downstream 155240 8247708 ~ 8275344 (+)
G153747 NA non-coding upstream 170386 7887566 ~ 7887780 (+)
G153702 NA non-coding upstream 696849 7360384 ~ 7361317 (+)
G153689 NA non-coding upstream 759654 7298154 ~ 7298512 (+)
G153687 NA non-coding upstream 760785 7297134 ~ 7297381 (+)
G153626 NA non-coding upstream 900291 7102205 ~ 7157875 (+)
G153816 NA non-coding downstream 158833 8251301 ~ 8278074 (+)
G153859 NA non-coding downstream 253210 8345678 ~ 8351749 (+)
G153955 NA non-coding downstream 637335 8729803 ~ 8730155 (+)
G154025 NA non-coding downstream 689521 8781989 ~ 8805304 (+)
G154030 NA non-coding downstream 701359 8793827 ~ 8796424 (+)
AMCG00005660 LOC106603524 other upstream 270295 7749183 ~ 7787871 (+)
AMCG00005694 NA other upstream 723595 7307058 ~ 7334571 (+)
G153675 NA other upstream 792195 7260677 ~ 7265971 (+)
AMCG00005663 NA other upstream 1395686 6608643 ~ 6662480 (+)
AMCG00005667 NA other upstream 1569384 6487718 ~ 6488782 (+)
G153815 NA other downstream 121436 8213904 ~ 8230590 (+)
AMCG00005720 NA other downstream 406034 8498502 ~ 8507097 (+)
AMCG00005787 NA other downstream 736110 8828578 ~ 8854100 (+)
G154251 NA other downstream 1343432 9435900 ~ 9438269 (+)
G154283 NA other downstream 1495334 9587802 ~ 9589798 (+)

Expression


Co-expression Network