AMCG00005733


Basic Information

Item Value
gene id AMCG00005733
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8104466 ~ 8107046 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005733
CCCTGCCACAGGAACACGGAAGCGACGGTCACAACCTCGCCgcgtttctttattttctctctaatTACCGATCGAGATGCagataataaaatgcacaacaGGATCATATTAAAGTTGTATTAGTAGGCTAGTTATGCTATTAAGATTTGATCTCCTCGTATTTTCTGGTGTATGTTCGGTTTCTTCTGCGGGAATGGTGTTTGACCTTTCtggattttaaaaagACGAAAATGGCCAAAGCAGTCCGATCATTTTCAGACGTGAAGGATGTTATACTTTCTTGTCATAAAGATGCGACCCCCGAGGATAAAATGGGTTTCTATGACAAGTGGGCAGATAACTATGAGCAGGATGTTGCCATACTGGACTACAGAGCCCCAGGCCTGGCAGCAGATGCCCTGGCAGCAGGTTTTCAGGGAGACCGAGAGAACGCAGTCGTTCTGGATGTGGCTTGTGGAACCGGCCTGGTGGCCTCGAGGCTGCAGACACTGGGGTTTCGCAGGTTTGTGGGAGTGGATGGCAGTGAGGCGATGCTACGGCAGGCCCGGGACCGAGGACTGTACCAGGAGCTcctgcagtgcatgctgggatctGAGGAACTCCCTGTCCCAGTTGAAACCTACAATGCTGTTCTTATAGTTGGGGCACTTAGTGTGGGACAAGTACCCCTCACTGTCATCAAAGACCTGTGGAAAGCGACAAAGCCAGGTGGATATGTGTGCATGACAACACGGGGAAACACATCCAACAAGGGCTTCAAAGATCAGCTGGAGTGTCTCCTGAAGAAGATGGAGACAGAGGGGCTGTGGACGGCCGTGTCCGTCACCGAAGTGCAGGCGTGGGAGAGAGCCGTGTCCGACGAAGAGGCGGGCTACATACCTGGAGCCGTGTACCTGTACCGGAAGACTGCGCTGTAACAGAAAGATACAGaggaattaatttaatgaaagtgTGATAGTCTAGACTGTGCAAAGGATTGTGCAAACATTGATATACTTTGGATAATGGATATATGAtttgtttcacttgtttaaCAGATGGATGATTTGtttgctcttgtttttttcaacCCGTTTTCATAAACATTTCCCACAGTGAGCGAAAGCATACCGACACaaagaacattcaaaaataataaaaggatttgGAAGTTTGTGTCCTGGGtccgtttttctggatttttttgttgttattctgtctctcactgttaaaatacacctaccattaaaatta

Function

GO: NA

KEGG:

id description
K24419 METTL27; methyltransferase-like protein 27

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005733 True 1233 mRNA 0.47 6 8104466 8107046

Neighbor

gene id symbol gene type direction distance location
AMCG00005734 NA coding downstream 252 8102945 ~ 8104214 (-)
AMCG00005703 LOC108424094,LOC105905016,LOC103377858 coding downstream 38243 8037028 ~ 8066223 (-)
AMCG00005701 abhd11,LOC107715343 coding downstream 78754 8023532 ~ 8025712 (-)
AMCG00005702 phkg1,LOC107677094,LOC107747678 coding downstream 105366 7989356 ~ 7999100 (-)
AMCG00005717 psph coding downstream 126686 7976058 ~ 7977780 (-)
AMCG00005706 LOC108431303,LOC105027537,LOC106602836,LOC103362281 coding upstream 239114 8346160 ~ 8363063 (-)
AMCG00005724 mettl16,LOC102789714,LOC107585611 coding upstream 270190 8377236 ~ 8398525 (-)
AMCG00005729 NA coding upstream 297311 8404357 ~ 8404870 (-)
AMCG00005726 pafah1b1,LOC107585584,LOC107743664,LOC107744786,LOC107664934 coding upstream 297928 8404974 ~ 8417809 (-)
AMCG00005723 cluh coding upstream 335076 8442122 ~ 8461544 (-)
G153779 NA non-coding downstream 82826 7984240 ~ 8021640 (-)
G153778 cct6a non-coding downstream 120535 7982030 ~ 7983931 (-)
G153742 NA non-coding downstream 229424 7874787 ~ 7875042 (-)
G153681 NA non-coding downstream 825701 7278504 ~ 7278765 (-)
G153678 vmp1,LOC105021956,LOC107728773 non-coding downstream 902180 7179628 ~ 7202286 (-)
G153980 NA non-coding upstream 467146 8574192 ~ 8588222 (-)
G154010 NA non-coding upstream 622757 8729803 ~ 8730149 (-)
G154126 NA non-coding upstream 880235 8987281 ~ 9024879 (-)
G154150 NA non-coding upstream 988625 9095671 ~ 9108363 (-)
G154157 blmh,LOC106612652 non-coding upstream 1021724 9128770 ~ 9139826 (-)
AMCG00005704 NA other downstream 103061 7999336 ~ 8001405 (-)
G153733 auts2 other downstream 316145 7785554 ~ 7788321 (-)
AMCG00005685 NA other downstream 958659 7109218 ~ 7145807 (-)
AMCG00005674 NA other downstream 1607895 6490255 ~ 6496571 (-)
AMCG00005628 LOC107090330,LOC102220786 other downstream 1870438 6232159 ~ 6234028 (-)
G154142 NA other upstream 983376 9090422 ~ 9092573 (-)
G154250 NA other upstream 1318244 9425290 ~ 9434940 (-)
AMCG00005850 NA other upstream 2188553 10295599 ~ 10352782 (-)
AMCG00005862 NA other upstream 2436488 10543534 ~ 10551355 (-)
AMCG00005839 LOC103367321,LOC107729686,LOC103398303 other upstream 2631498 10738544 ~ 10752114 (-)

Expression


Co-expression Network