AMCG00005734


Basic Information

Item Value
gene id AMCG00005734
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8102945 ~ 8104214 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005734
ATGTTGCCATACTGGACTACAGAGCCCCAGGCCTGGCAGCAGATGCCCTGGCAGCAGGTTTTCAGGGAGACCGAGAGAACGCAGTTGTTCTGGATGTGGCTTGTGGAACCGGCCTGGTGGCCTCGAGGGTCTGTGGGAGTGGATGGCAGCGCAGCGATGCTACGGCTGGCCAGGAACAGAGGACTGTACCAGGAGCTcctgcaAGACGTACGATGTGGTCGTTTTGTCGGGGCTTTAAGTGTTGGACACGTCCCTGTCACCATCATCAGAGAGCTGTGGCGGGTTACAAAGCCAGGAGGGTTTGTGTGCATGACAACGCGCGGTAACACATCCGACGAGGAGTACAAAGACCGCCTGGAGAGTCTCCTGGCCGAGATGGAGAGCGAAGGGCTGTGGGGACCCGTCTCCGTCACCGAAGTGAAAGAGCTCATAAGGGCCGGGTCCGTGCAGGAGTCCGGCTACATCCCCGGACACGTGTACCTCTACAGAAAGACTTCACAGTAA

Function

GO:

id name namespace
GO:0005911 cell-cell junction cellular_component
GO:0005921 gap junction cellular_component
GO:0005922 connexin complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005734 True 504 mRNA 0.59 4 8102945 8104214

Neighbor

gene id symbol gene type direction distance location
AMCG00005703 LOC108424094,LOC105905016,LOC103377858 coding downstream 36722 8037028 ~ 8066223 (-)
AMCG00005701 abhd11,LOC107715343 coding downstream 77233 8023532 ~ 8025712 (-)
AMCG00005702 phkg1,LOC107677094,LOC107747678 coding downstream 103845 7989356 ~ 7999100 (-)
AMCG00005717 psph coding downstream 125165 7976058 ~ 7977780 (-)
AMCG00005716 NA coding downstream 136685 7954131 ~ 7966260 (-)
AMCG00005733 NA coding upstream 252 8104466 ~ 8107046 (-)
AMCG00005706 LOC108431303,LOC105027537,LOC106602836,LOC103362281 coding upstream 241946 8346160 ~ 8363063 (-)
AMCG00005724 mettl16,LOC102789714,LOC107585611 coding upstream 273022 8377236 ~ 8398525 (-)
AMCG00005729 NA coding upstream 300143 8404357 ~ 8404870 (-)
AMCG00005726 pafah1b1,LOC107585584,LOC107743664,LOC107744786,LOC107664934 coding upstream 300760 8404974 ~ 8417809 (-)
G153779 NA non-coding downstream 81305 7984240 ~ 8021640 (-)
G153778 cct6a non-coding downstream 119014 7982030 ~ 7983931 (-)
G153742 NA non-coding downstream 227903 7874787 ~ 7875042 (-)
G153681 NA non-coding downstream 824180 7278504 ~ 7278765 (-)
G153678 vmp1,LOC105021956,LOC107728773 non-coding downstream 900659 7179628 ~ 7202286 (-)
G153980 NA non-coding upstream 469978 8574192 ~ 8588222 (-)
G154010 NA non-coding upstream 625589 8729803 ~ 8730149 (-)
G154126 NA non-coding upstream 883067 8987281 ~ 9024879 (-)
G154150 NA non-coding upstream 991457 9095671 ~ 9108363 (-)
G154157 blmh,LOC106612652 non-coding upstream 1024556 9128770 ~ 9139826 (-)
AMCG00005704 NA other downstream 101540 7999336 ~ 8001405 (-)
G153733 auts2 other downstream 314624 7785554 ~ 7788321 (-)
AMCG00005685 NA other downstream 957138 7109218 ~ 7145807 (-)
AMCG00005674 NA other downstream 1606374 6490255 ~ 6496571 (-)
AMCG00005628 LOC107090330,LOC102220786 other downstream 1868917 6232159 ~ 6234028 (-)
G154142 NA other upstream 986208 9090422 ~ 9092573 (-)
G154250 NA other upstream 1321076 9425290 ~ 9434940 (-)
AMCG00005850 NA other upstream 2191385 10295599 ~ 10352782 (-)
AMCG00005862 NA other upstream 2439320 10543534 ~ 10551355 (-)
AMCG00005839 LOC103367321,LOC107729686,LOC103398303 other upstream 2634330 10738544 ~ 10752114 (-)

Expression


Co-expression Network