AMCG00005746


Basic Information

Item Value
gene id AMCG00005746
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 9010184 ~ 9016738 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005746
ttctcagaagtgaaagaaaaacaaccagaTCTAAACAtggaggagagagcaggagacaGCAAAGTGTGCAGCAACTGTAAGAAGAAGGTGGCGGTGGCCAATTTCGCCCTTCACGAGCCGCACTGTCTGCGCTTCCTGGGTCTGTGCCCTGACTGCGATGAGCCAGTGCCCCACGACCAGCTTGAGGAGCATCGCCAGACTGAGCACAGCCAGGTCCGATGTCCGCAGTGTAAGAAGAAGGTAGAGAACTGCAAACTGGAGGAGCATAAGCTGCAGGAGCACCGGGAGCAGTGTGGGAGCAAGACCCAGCAATGCCCCGACTGCGGCCGCTACATCAAGCTCCGGGATGTGGATGCCCACGCCCTGACCTGCACCCCTACGGCCCCGACCGAGAGTGAGGTGCTGGAGGACACAGCGGCCCCTATCCCTCGGGCTCCAACACAGAAGCCCTCCTCTGAGCTGTGCTGGTACTGCATGAAGTCCTTCCCCCCTGAGCAGCTGAAAGCACACCAGGTGGACTGCTATACGGAGTCCCCCCCTAAGGATGAACCCCGTTACCAGCAGGACCCCCGGCCTCATTTTGGGGTGCCCCGCTCCTCGCGCTCCACCCCCTATCCACTGTGGGGGTGCAAGGGACCAGGCTGGGAGGAGACAGAAGGCGCAGACTTGGACGAGATCAGGACTTGTTCCAACTGCCACCTGGCCCTCCCGGTGGCCACTCTGCGATGGCACGAGgcaaagtGTCTGCAGTACAAAGGCTTGAGGAAGGGCCTGGCTCAGTGAAACCGCAAGCGCACCAGGAACAGGAGAGGATCAGCTCATGCGACACCCTGCCGCACAGAGAACACACATGTACAGAACGACTGAAACTCGCCGTTTCTTCCTGCGACATATCAATATCCTATTGGATGTTGTCATGCCTTCACCCCACACTTCCCCGGTTCATCGCAAGAGGTCACAGTCTCCCgaattttagttttagttgtttttcttggaTTGTTTTCTTCAGCACCTTGTTAAGGCTAATGGATCCCCGTTGCGAAGTCATGTTTACCCTCCAAGTAGCCTTTCTGTGCATTATCTTCTTGTGATTGTTTCACACCACACTTGGGTTCTCTATCCCAGACTGTCACTGCGATACAGAAGTCTAGATTATTCTTTTTGCCCTTTAGGGagctttttcctgttttctttgttaGACAACATCTGAGACTAACATTTCtcttctgtatgtatatatagagagaaaatagtttttttttccattaatttatttccctgaCAGATTCTGTGTTAATTCCCAGTCCTGGGGTGTTAAATTGGGCGATAAGGACATGAACTCATTTCGATCTTTAACCATTGTGAATATTAGAGAATAGATAATGTGTGTGATAAGAGCAAGACTTTATTGCTTAGTTTACAAAGCCATGGTGTACTTTTCTGAGGGGCACCCCTGATTGGAAACATATGCAATGCTGTTGTCATCATCCCCCTCTTCGTAGTTCGAATTTTAGTCACTGTTAATCTTTCCATCCCACGTCTGATAAATTCCAATAAATCACCCCATCCCCCTCTAAGAATTTCACTCTGCCATGCTATTAGAGCGGTACAGTTAATGGTCTTGACCCCCTCCAGAAAAATCACACTACGCCACTGTTTActgaatatatgtgtatattctCAGATATGGCGCTTTgggtaaaacattatttatctcTATAAAATTACAGGAGCTCATCAAAAAATATTGCTGGAGATTATTAGGCTTGAATGTGGAGGAGACCAACCTAATGAAGTTTTGATCAAACCTCCATTCAAATTTTGATAATTTTCAGGAGTGATCAAAATCTACCACTGGTTCCACTGCACTACACTGATACTACACTGTTTAGCACTTTTAGAAAGCATAGTCGCACAGCCATCATTAAGTAATCAGATGTTTTTGAGTATTAATAGTAGGCTACAAACTAAGCAGCTACTGTTCATTATCATTTTGATTGTTAGTTATGAGTTTTTGCTCAATAAAGTATCTTTTTCATTGCATGTTATCgtttcattcaattaaattgtgcagtacattcaaaacaatgcaGGGGGCGTCTTGGT

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005746 True 2106 mRNA 0.47 8 9010184 9016738

Neighbor

gene id symbol gene type direction distance location
AMCG00005742 NA coding upstream 106100 8897277 ~ 8904084 (+)
AMCG00005788 NA coding upstream 126383 8876410 ~ 8883801 (+)
AMCG00005789 NA coding upstream 137059 8869909 ~ 8873125 (+)
AMCG00005790 NA coding upstream 145961 8862478 ~ 8864223 (+)
AMCG00005791 NA coding upstream 147812 8854382 ~ 8862372 (+)
AMCG00005745 NA coding downstream 18550 9035288 ~ 9039062 (+)
AMCG00005749 ncbp3 coding downstream 66414 9083152 ~ 9092563 (+)
AMCG00005751 blmh coding downstream 98733 9115471 ~ 9128845 (+)
AMCG00005752 NA coding downstream 114299 9131037 ~ 9139661 (+)
AMCG00005753 NA coding downstream 142493 9159231 ~ 9164216 (+)
G154025 NA non-coding upstream 204880 8781989 ~ 8805304 (+)
G154030 NA non-coding upstream 213760 8793827 ~ 8796424 (+)
G153955 NA non-coding upstream 280029 8729803 ~ 8730155 (+)
G153859 NA non-coding upstream 658435 8345678 ~ 8351749 (+)
G153816 NA non-coding upstream 732110 8251301 ~ 8278074 (+)
G154091 NA non-coding downstream 5212 9021950 ~ 9071747 (+)
G154143 NA non-coding downstream 77171 9093909 ~ 9094670 (+)
G154147 NA non-coding downstream 83691 9100429 ~ 9108370 (+)
G154175 NA non-coding downstream 175558 9192296 ~ 9194187 (+)
G154252 NA non-coding downstream 423755 9440493 ~ 9441381 (+)
AMCG00005787 NA other upstream 156084 8828578 ~ 8854100 (+)
AMCG00005720 NA other upstream 503087 8498502 ~ 8507097 (+)
G153815 NA other upstream 779594 8213904 ~ 8230590 (+)
AMCG00005660 LOC106603524 other upstream 1222313 7749183 ~ 7787871 (+)
AMCG00005694 NA other upstream 1675613 7307058 ~ 7334571 (+)
G154251 NA other downstream 419162 9435900 ~ 9438269 (+)
G154283 NA other downstream 571064 9587802 ~ 9589798 (+)
G154330 NA other downstream 864644 9881382 ~ 9883955 (+)
AMCG00005802 NA other downstream 1048422 10065160 ~ 10089769 (+)
AMCG00005929 NA other downstream 1250535 10267273 ~ 10356244 (+)

Expression


Co-expression Network