AMCG00005753


Basic Information

Item Value
gene id AMCG00005753
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 9159231 ~ 9164216 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005753
atggcGGTAAGGTTTGTGGAAAAGCAAGTGGGATCTAGAGCAGGGATTGCAGCTTATCAgcctgagagactgagggactgcAGATGGAAGAATGAACCAAGTCAGATTGTGGCCCTAACACGGGTGGAGCCCTTCCAACTGGGAGCATTCAGCCTAGCTTCCCGCACGAAGATTGACGCTGATCTGGGCTTCCTCCAGTCTGACCCCTCTGGCTTATCTTGTTGCTTCTGCTGCGGCAAAGTGCCTCTCTACACTACGCAGTTCGGTGCAGATAACCCCGCCTTCGAGAAGCCTGGATTGGATGAGATAACCCTGAGCCAATTGCACACACACCTGGGCTGGAAAGGGGCGGAGCTTCGCATCCAGCACGGCCAATCCCCACTGGCCCTGCTTCCTGCTGCCCTTCCTCCTTCCTCTACTGCAGCAGATGGGAGCCACAGCACCAGGTACCAGAGTTCCACCGCCACGCCCATAGCCGCCACCACCGCCACAGCCATGGAGATGAAGCAGCCGATGATGATGGAGAACAGCAACCCGAGCTCTGCCCCCGAAAGTGAGGAACTCTGGGAGAACGGGCTGCTGATTGGGGGGGGCAGTGGCGCCCCCCAGGAAGGAGACAAGGGACTGGCGGGGGAGAAGTTTAACTCCGCCATAGGGCAGGTGTCGAACGGATACCCCTCGTCCCCACAGAGTCCCGGGGAGGGGGGCATGGCTTGGCACGGCCAGCTGGCGCACAGGAGTCCCCCATCAAACACACatgtcaaaacacacaaacacattccaGATCAGAACGCAGCCCTGCCGGACCAGGGGAACAGCCCTCACATCAGGcagaaaaaagtataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005753 True 846 mRNA 0.58 4 9159231 9164216

Neighbor

gene id symbol gene type direction distance location
AMCG00005752 NA coding upstream 19570 9131037 ~ 9139661 (+)
AMCG00005751 blmh coding upstream 30386 9115471 ~ 9128845 (+)
AMCG00005749 ncbp3 coding upstream 66668 9083152 ~ 9092563 (+)
AMCG00005745 NA coding upstream 120169 9035288 ~ 9039062 (+)
AMCG00005746 NA coding upstream 142493 9010184 ~ 9016738 (+)
AMCG00005750 NA coding downstream 817 9165033 ~ 9180805 (+)
AMCG00005774 ssh2 coding downstream 76418 9240634 ~ 9251830 (+)
AMCG00005775 NA coding downstream 88138 9252354 ~ 9269236 (+)
AMCG00005784 NA coding downstream 135369 9299585 ~ 9330590 (+)
AMCG00005783 NA coding downstream 182227 9346443 ~ 9349421 (+)
G154147 NA non-coding upstream 50861 9100429 ~ 9108370 (+)
G154143 NA non-coding upstream 64561 9093909 ~ 9094670 (+)
G154091 NA non-coding upstream 87484 9021950 ~ 9071747 (+)
G154025 NA non-coding upstream 353927 8781989 ~ 8805304 (+)
G154175 NA non-coding downstream 28080 9192296 ~ 9194187 (+)
G154252 NA non-coding downstream 276277 9440493 ~ 9441381 (+)
G154343 NA non-coding downstream 741556 9905772 ~ 9944143 (+)
G154388 NA non-coding downstream 914091 10078307 ~ 10079436 (+)
G154447 NA non-coding downstream 1121298 10285514 ~ 10332094 (+)
AMCG00005787 NA other upstream 305131 8828578 ~ 8854100 (+)
AMCG00005720 NA other upstream 652134 8498502 ~ 8507097 (+)
G153815 NA other upstream 928641 8213904 ~ 8230590 (+)
AMCG00005660 LOC106603524 other upstream 1371360 7749183 ~ 7787871 (+)
AMCG00005694 NA other upstream 1824660 7307058 ~ 7334571 (+)
G154251 NA other downstream 271684 9435900 ~ 9438269 (+)
G154283 NA other downstream 423586 9587802 ~ 9589798 (+)
G154330 NA other downstream 717166 9881382 ~ 9883955 (+)
AMCG00005802 NA other downstream 900944 10065160 ~ 10089769 (+)
AMCG00005929 NA other downstream 1103057 10267273 ~ 10356244 (+)

Expression


Co-expression Network