AMCG00005755


Basic Information

Item Value
gene id AMCG00005755
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8772389 ~ 8776872 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005755
atgtgcaaaacaaggCAAGGTAAACAGAGGGAGGTGAGTGATCTCGCAGCGCACGGATTGGCAGGACTCAGTCGCCTGTCTCTGAGGGTCCCATTCCTGTCTGCAGACCCTCAGAGACGAGACACCATGAAGCTGGCGGTGATCCTGCTTCTCACCGGGCTGGGCATTGCCCTGGCTGCGGAGGACTCCTGCGATGGCCGCTGCGACAACGGCTTTGAATCCAGTAAGAAGTGTCAGTGCGACTCCATGTGCAAATACTACAAGAGCTGCTGCATCGACTACGACAGCGTCTGCAAGGTGAAAGCTCGCGGCGACGTCTTCAACTTCCCCGAGGACGATTATGACTACTACAGCAACAACGACACAGCCACCTCCACCGGCCCGCCTGTGTCCGGGGCCACCCTGAGGCCCAACAGCTTCAAACCCGGCCACACCGACACCCAGGACATCCACCCAACCCTCAGCACATCCCAGTCACCCGCACCCCCAACCATAGCCGGGCCCGCGGCACCCTCCAACTCCAGTGGCCCTCTGCCAGAGGCAGAAGCCTGCAGCGGGAAGTCTTTTGATGCCTTCATGCAGCTGAAGAACGGTTCCATCTTCGCATTCAGAGTGTCCAATAACGTGACTGTTTTGACTGGGGGGACTCCAGGGGAGAATTTCTATGAGCTGGACGAGAAGGCGGTGAAGCCCGGATACCCCAAACTCATCAAGGATGTGTGGGGCATCGAGGGGCCCATCGATGCCGCCTTCACCCGCATCAACTGCCAGGGCAAGACCTACATCTTCAAGGGAAACCAGTACTGGCGTTTCGACGACACCGTCATGGACCCGGACTACCCGCGCGACATCTCCGTCGGCTTCACCAAAATCCCTGGCCACGTGGACGCAGCCTTCGCCCTCCCCGCCCCCGGCTACTACGGCAAGGAGAAGGTCTACTTCTTCAAAGGAGACCAGTACTACCAGTACGAGTTCAGGCACCAGCCGTCCCAGGAAGAGTGCAACAAGATAGCCGGCTCCACACAGTTCATCCGCTACACCGCGCTGTACAAGGACAGCTTCGAGGATCTGTTCAGCTTCCTCTTCCAAAGCAGtaagagagggtgggggggcaggaacGCTATGAGCGCTACTTCTTTCTACGGCGTGCACAGCGGTAGCACCGGGCCGCGCTCCATCAGAAGGGACTGGGTTGGGATCCAGGGCCCGGTGGATGCGGTGATGGCCGGGCGGCTCTACGTCTCCCCCAAGACGCCAGCAGCCGTCAGCAGGAAGCAGGGAAACAGGAGGCGTAATGGCAACAGAAGGAGGGCCGGGAGGAACAAGGGCCGCAGGCAGAGCCGATCCCTGTCCTGGGACATCTTGGACCTGGGCCTGGACCTGGGCCTGGGCTTTGACTATAACCCGGACAGGGACCACAAGCCAGGCCAGAACAGGTACAACGGCAACcggcagcaacagcagcaacagcagcagcagcagcagggcgaCTATTATGACTACAACTACGGCCTGAATCTCCCCGGCATCGACTCCACCAGCAAGTGCCAAGTGCCCATCCAGAACATCTACTTCTTCATCCAAGacaaATACTACCGCGTCAACCTACAGACAAAGAGAGTCGACTCTGCACATCCCCCGTACCCAAGATCCATTGCCAAATACTGGCTGGGCTGCCCGGAGAAAGACTTGGCGGAGAAAAAATGAGCGGCGGTGCATTCAGCATAACTGTAATCGCAGACATAACACAGTGGCAGGCGGATTACGGTGCAGAGGTGTAGCAATGCGCGGCTCTAGCATGTCTTTAAAGACATGGAttattaaaagttttttttttttggaattgggTAATTAAACTGTTTCTGGACACTGTGTGCAGTCTGTGGtcgttttcttcttttcccccGAAACACAGGACTAAATTAACCCATAGTCCATATTGTGAATCTATCACAGTGAGGACAGTTTTACTACAATATTAGttattactgtttgttttcctggcaAATATACAACACATTTATGGGACTTTAATCTTCACAATCGTAGCCAGGCAGCACCAACTAACTTCCTAACAGTTTTTTCGTTCAGATGCCCTCACTGGATGTTGCCAC

Function

GO: NA

KEGG:

id description
K06251 VTN; vitronectin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005755 True 2114 mRNA 0.55 8 8772389 8776872

Neighbor

gene id symbol gene type direction distance location
AMCG00005754 NA coding upstream 10319 8756975 ~ 8762070 (+)
AMCG00005757 unc119b,LOC107713212,LOC108431312,LOC107704800 coding upstream 56665 8707225 ~ 8715724 (+)
AMCG00005756 crybb1,LOC105898201,LOC102220912,LOC106612853 coding upstream 75401 8695146 ~ 8696988 (+)
AMCG00005738 NA coding upstream 97572 8673120 ~ 8674817 (+)
AMCG00005735 NA coding upstream 104966 8661807 ~ 8667423 (+)
AMCG00005791 NA coding downstream 77510 8854382 ~ 8862372 (+)
AMCG00005790 NA coding downstream 85606 8862478 ~ 8864223 (+)
AMCG00005789 NA coding downstream 93037 8869909 ~ 8873125 (+)
AMCG00005788 NA coding downstream 99538 8876410 ~ 8883801 (+)
AMCG00005742 NA coding downstream 120405 8897277 ~ 8904084 (+)
G153955 NA non-coding upstream 42234 8729803 ~ 8730155 (+)
G153859 NA non-coding upstream 420640 8345678 ~ 8351749 (+)
G153816 NA non-coding upstream 494315 8251301 ~ 8278074 (+)
G153747 NA non-coding upstream 884609 7887566 ~ 7887780 (+)
G153702 NA non-coding upstream 1411072 7360384 ~ 7361317 (+)
G154025 NA non-coding downstream 5117 8781989 ~ 8805304 (+)
G154030 NA non-coding downstream 16955 8793827 ~ 8796424 (+)
G154091 NA non-coding downstream 245078 9021950 ~ 9071747 (+)
G154143 NA non-coding downstream 317037 9093909 ~ 9094670 (+)
G154147 NA non-coding downstream 323557 9100429 ~ 9108370 (+)
AMCG00005720 NA other upstream 265292 8498502 ~ 8507097 (+)
G153815 NA other upstream 541799 8213904 ~ 8230590 (+)
AMCG00005660 LOC106603524 other upstream 984518 7749183 ~ 7787871 (+)
AMCG00005694 NA other upstream 1437818 7307058 ~ 7334571 (+)
G153675 NA other upstream 1506418 7260677 ~ 7265971 (+)
AMCG00005787 NA other downstream 51706 8828578 ~ 8854100 (+)
G154251 NA other downstream 659028 9435900 ~ 9438269 (+)
G154283 NA other downstream 810930 9587802 ~ 9589798 (+)
G154330 NA other downstream 1104510 9881382 ~ 9883955 (+)
AMCG00005802 NA other downstream 1288288 10065160 ~ 10089769 (+)

Expression


Co-expression Network